RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 HMG20AQ9NP66 347 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 MRPL40Q9NQ50 206 aaKnown RBP14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 OXSMQ9NWU1 459 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 KLHL3Q9UH77 587 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 PCDHGA3Q9Y5H0 932 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 DOCK1Q14185 1865 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 ANKRD34BA5PLL1 514 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 MAFGO15525 162 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 SPRP35270 261 aaPredicted RBP14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 KRT76Q01546 638 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 STX5Q13190 355 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 INAVAQ3KP66 663 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 SLC36A3Q495N2 470 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 IFNEQ86WN2 208 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 SIX5Q8N196 739 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 OR2T34Q8NGX1 318 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 OR2T3Q8NH03 318 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 PPP1R13LQ8WUF5 828 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 SEPT8Q92599 483 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 C12orf42Q96LP6 360 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 TSNARE1Q96NA8 513 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 ING2Q9H160 280 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 B3GNT3Q9Y2A9 372 aa14.84□□□□□ -0.03
NCKIPSD-204ENST00000416649 A0A1W2PQ67 120 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 SYNCRIPO60506 623 aaKnown RBP14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 GPC4O75487 556 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 SRP72O76094 671 aaKnown RBP14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 IL18RAPO95256 599 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 SNAP29O95721 258 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 BMP2P12643 396 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 PGAM1P18669 254 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 LRPAP1P30533 357 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 SPCS2Q15005 226 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 HERC3Q15034 1050 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 STXBP2Q15833 593 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 C6orf10Q5SRN2 563 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 OTUD3Q5T2D3 398 aaPredicted RBP14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 HTRA1Q92743 480 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 NRBF2Q96F24 287 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 CSF3RQ99062 836 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 TDRD1Q9BXT4 1180 aaKnown RBP14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 LHPPQ9H008 270 aa14.83□□□□□ -0.03
NCKIPSD-204ENST00000416649 AURKAO14965 403 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 JRKO75564 520 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 ALDH1A2O94788 518 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 EDN1P05305 212 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 POLBP06746 335 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 GJB1P08034 283 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 HNRNPLP14866 589 aaKnown RBP eCLIP14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 TPSB2P20231 275 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 FASP25445 335 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 RGS7P49802 495 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 LSM3P62310 102 aaKnown RBP14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 TPSAB1Q15661 275 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 MAPRE1Q15691 268 aaKnown RBP14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 IL31Q6EBC2 164 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRNP1Q6NT89 227 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 LBX2Q6XYB7 198 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 COLGALT1Q8NBJ5 622 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 SGCDQ92629 289 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 COPS5Q92905 334 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 RTP4Q96DX8 246 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 CNPY3Q9BT09 278 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRIM8Q9BZR9 551 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 TMEM9Q9P0T7 183 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 ADAMTS5Q9UNA0 930 aa14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 MRPL42Q9Y6G3 142 aaKnown RBP14.83□□□□□ -0.04
NCKIPSD-204ENST00000416649 DHRS12A0PJE2 317 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 NOTOA8MTQ0 251 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 XYLBO75191 536 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 TGM2P21980 687 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 IL10P22301 178 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYP2F1P24903 491 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 IFITM3Q01628 133 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 LIPMQ5VYY2 423 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYP4V2Q6ZWL3 525 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 DDIASQ8IXT1 998 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PARP8Q8N3A8 854 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 OR13F1Q8NGS4 319 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 ARNTL2Q8WYA1 636 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 EFHD2Q96C19 240 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 LGMNQ99538 433 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 SNRNP25Q9BV90 132 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZNF385DQ9H6B1 395 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 TLK1Q9UKI8 766 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 MFHAS1Q9Y4C4 1052 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PHIPQ8WWQ0 1821 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 GUCY1B2O75343 617 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 ALDH4A1P30038 563 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 CDH5P33151 784 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 MAGEA6P43360 314 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 JAK3P52333 1124 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 POLD3Q15054 466 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PPP1R3AQ16821 1122 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 SAMD4BQ5PRF9 694 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 GRTP1Q5TC63 336 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms