RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 OR12D3Q9UGF7 316 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SORCS3Q9UPU3 1222 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ABCC6O95255 1503 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 XRN1Q8IZH2 1706 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 NUMA1Q14980 2115 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MAGEB16A2A368 324 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 RHOCP08134 193 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 SNRPB2P08579 225 aaKnown RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 HADHBP55084 474 aaKnown RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 SFT2D3Q587I9 215 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 SPANXN3Q5MJ09 141 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 AAGABQ6PD74 315 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 IL27RAQ6UWB1 636 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 NANOGNBQ7Z5D8 188 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 XYLT1Q86Y38 959 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 TERB1Q8NA31 727 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 FNIP1Q8TF40 1166 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 MED8Q96G25 268 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 CDH19Q9H159 772 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 HMG20AQ9NP66 347 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 TAS2R13Q9NYV9 303 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 TPRKBQ9Y3C4 175 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 THP07101 528 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 SNAPC2Q13487 334 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 USP39Q53GS9 565 aaKnown RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 CLEC6AQ6EIG7 209 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 SPPL2CQ8IUH8 684 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 REPS2Q8NFH8 660 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 RAET1EQ8TD07 263 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 ANAPC2Q9UJX6 822 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 BTBD3Q9Y2F9 522 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 TMEM114B3SHH9 223 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 FOXD2O60548 495 aaPredicted RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 CRHR1P34998 444 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 IL12RB1P42701 662 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 IDH3AP50213 366 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 DGUOKQ16854 277 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 FRMD7Q6ZUT3 714 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 NIPA1Q7RTP0 329 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 CDH24Q86UP0 819 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 HGH1Q9BTY7 390 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 OSGEPL1Q9H4B0 414 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 HMGXB4Q9UGU5 601 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 RAP2CQ9Y3L5 183 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 TTLL13PA6NNM8 815 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 H3BSA7 217 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 DNAJA2O60884 412 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 RAMP2O60895 175 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 VNN1O95497 513 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 HGFP14210 728 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 XRCC1P18887 633 aaPredicted RBP13□□□□□ -0.33
SCN1B-202ENST00000415950 OR1E1P30953 314 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 NR2C2P49116 596 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 RAB27AP51159 221 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 MADCAM1Q13477 382 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 YAF2Q8IY57 180 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 DPP10Q8N608 796 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 POC5Q8NA72 575 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 OR7A2PQ8NGA2 310 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 FBXO27Q8NI29 283 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 PSMA8Q8TAA3 256 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 PCDH19Q8TAB3 1148 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 NXNL1Q96CM4 212 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 TEKT5Q96M29 485 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 C7orf26Q96N11 449 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 SLC39A3Q9BRY0 314 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 SERHL2Q9H4I8 314 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 SERHLQ9NQF3 203 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 INVSQ9Y283 1065 aa13□□□□□ -0.33
SCN1B-202ENST00000415950 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 SNTNA6NMZ2 147 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 MTA2O94776 668 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CCT3P49368 545 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CYP4F2P78329 520 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 PPP1R8Q12972 351 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 KLF1Q13351 362 aaPredicted RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 TRIM71Q2Q1W2 868 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 LSM12Q3MHD2 195 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 NADK2Q4G0N4 442 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CTXN3Q4LDR2 81 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 PRMT9Q6P2P2 845 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 ATG14Q6ZNE5 492 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 TDRPQ86YL5 185 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CIPCQ9C0C6 399 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 EPB41L4BQ9H329 900 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 EFCAB10A6NFE3 127 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 RECQL4O94761 1208 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 LINC00032P0C843 101 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 KLRC2P26717 231 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 MAPK1P28482 360 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms