RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 VN1R3Q9BXE9 311 aa11.51□□□□□ -0.57
RUBCN-204ENST00000415452 NMRAL1Q9HBL8 299 aa11.51□□□□□ -0.57
RUBCN-204ENST00000415452 BATF3Q9NR55 127 aa11.51□□□□□ -0.57
RUBCN-204ENST00000415452 HSFX1Q9UBD0 423 aa11.51□□□□□ -0.57
RUBCN-204ENST00000415452 MARCOQ9UEW3 520 aaPredicted RBP11.51□□□□□ -0.57
RUBCN-204ENST00000415452 STK38LQ9Y2H1 464 aa11.51□□□□□ -0.57
RUBCN-204ENST00000415452 FCHO1O14526 889 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ITM2AO43736 263 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 PRAMEF11O60813 436 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 APOA4P06727 396 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 DNAJB1P25685 340 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 PTPN4P29074 926 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 SLC11A2P49281 568 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 IRF9Q00978 393 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 TLE2Q04725 743 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 CTBP1Q13363 440 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 HSF5Q4G112 596 aaPredicted RBP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 HECTD3Q5T447 861 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 KLHDC10Q6PID8 442 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 DENND6AQ8IWF6 608 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ARRDC2Q8TBH0 407 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 SREK1Q8WXA9 508 aaKnown RBP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 TADA1Q96BN2 335 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 MYEOVQ96EZ4 313 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 NSL1Q96IY1 281 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 TSNARE1Q96NA8 513 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 MID2Q9UJV3 735 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 TMEM98Q9Y2Y6 226 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ZNF840PA6NDX5 716 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 LYPLA1O75608 230 aaPredicted RBP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 COL6A2P12110 1019 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ACVRL1P37023 503 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 TMCO4Q5TGY1 634 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 CNKSR3Q6P9H4 555 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 TNS4Q8IZW8 715 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 PGBD5Q8N414 524 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 C2CD4AQ8NCU7 369 aaPredicted RBP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 OR6Y1Q8NGX8 325 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ZNF461Q8TAF7 563 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 GABPB2Q8TAK5 448 aaPredicted RBP11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ZNF599Q96NL3 588 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 CLSTN3Q9BQT9 956 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 NOD2Q9HC29 1040 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 ARL8BQ9NVJ2 186 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 BAIAP2L1Q9UHR4 511 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 DNAJC16Q9Y2G8 782 aa11.5□□□□□ -0.57
RUBCN-204ENST00000415452 G3V2L1 256 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 CCDC22O60826 627 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SMNDC1O75940 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ABLIM3O94929 683 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 PAPSS2O95340 614 aaPredicted RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SEC24AO95486 1093 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SLC6A4P31645 630 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ETFBP38117 255 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SLC1A2P43004 574 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ABCE1P61221 599 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 MPP1Q00013 466 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ROR2Q01974 943 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SLC12A1Q13621 1099 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ITGA9Q13797 1035 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 TRIM60Q495X7 471 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 TSTD2Q5T7W7 516 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 NEPROQ6NW34 567 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 KIAA0408Q6ZU52 694 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 RDH11Q8TC12 318 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 CALML6Q8TD86 181 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 MAGEC3Q8TD91 643 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 UTP4Q969X6 686 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 PTCD3Q96EY7 689 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 MAGEH1Q9H213 219 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 FAM96AQ9H5X1 160 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 STN1Q9H668 368 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 LOC285095A0A1B0GVY8 99 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 H2AFYO75367 372 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 GJB5O95377 273 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SOD2P04179 222 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 HMGA1P17096 107 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SAT1P21673 171 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 CALB2P22676 271 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 LBX1P52954 281 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ZNF235Q14590 738 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 IHHQ14623 411 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 TPGS2Q68CL5 300 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 ZNF470Q6ECI4 717 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SLC41A1Q8IVJ1 513 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 CFAP52Q8N1V2 620 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 PLD4Q96BZ4 506 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 PRR11Q96HE9 360 aaPredicted RBP11.49□□□□□ -0.57
RUBCN-204ENST00000415452 MYRFLQ96LU7 910 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 SORT1Q99523 831 aa11.49□□□□□ -0.57
RUBCN-204ENST00000415452 TBC1D10AQ9BXI6 508 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms