RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 LHX1P48742 406 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 POU4F1Q01851 419 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 TMEM62Q0P6H9 643 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 GALNT1Q10472 559 aaPredicted RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 UBXN11Q5T124 520 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 PPHLN1Q8NEY8 458 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 TMA16Q96EY4 203 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 TBL1YQ9BQ87 522 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 EML4Q9HC35 981 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 DDIT4Q9NX09 232 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 PIN4Q9Y237 131 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 PTCH2Q9Y6C5 1203 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 CENPFP49454 3210 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 FAM95CA0A1B0GW59 222 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 SDHDO14521 159 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 FOXD2O60548 495 aaPredicted RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 C8BP07358 591 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 ZNF26P17031 533 aaPredicted RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 EPHX2P34913 555 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 ARCN1P48444 511 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 GEMP55040 296 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 NR1H2P55055 460 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 CDH15P55291 814 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 TRIM25Q14258 630 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 PTK2BQ14289 1009 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 MGAT5BQ3V5L5 792 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 WSCD1Q658N2 575 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 RPS27LQ71UM5 84 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 SLC41A1Q8IVJ1 513 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 SCML4Q8N228 414 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 LZTR1Q8N653 840 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 PCDH20Q8N6Y1 951 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 C2CD4AQ8NCU7 369 aaPredicted RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 SNRNP27Q8WVK2 155 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 NXNL1Q96CM4 212 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 HSPBAP1Q96EW2 488 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 SMOQ99835 787 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 FTHL17Q9BXU8 183 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 ENTPD7Q9NQZ7 604 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 XPR1Q9UBH6 696 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 DICER1Q9UPY3 1922 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 SHROOM3Q8TF72 1996 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 LRIG2O94898 1065 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 VAPBO95292 243 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 PGK1P00558 417 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 SMIM10L2AP0DMW4 78 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 SMIM10L2BP0DMW5 78 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 CDH2P19022 906 aaPredicted RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 PSME3P61289 254 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 CTBSQ01459 385 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 RHDQ02161 417 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 SQLEQ14534 574 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 SNX17Q15036 470 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TSTD2Q5T7W7 516 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 GK5Q6ZS86 529 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 KIAA0408Q6ZU52 694 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 GABPB2Q8TAK5 448 aaPredicted RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 HMGCLL1Q8TB92 370 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 LRTOMTQ8WZ04 291 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 ABTB1Q969K4 478 aaPredicted RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 IL12RB2Q99665 862 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TRIM62Q9BVG3 475 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 PRKD2Q9BZL6 878 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TKTL2Q9H0I9 626 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 RNF39Q9H2S5 420 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 ABHD16BQ9H3Z7 469 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 COQ10BQ9H8M1 238 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 MEAF6Q9HAF1 191 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TNFRSF12AQ9NP84 129 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 CRTAC1Q9NQ79 661 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 IPPQ9Y573 584 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 PCDHGA7Q9Y5G6 932 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 PLXNB2O15031 1838 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 COL4A4P53420 1690 aaPredicted RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 KCNU1A8MYU2 1149 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 STT3AP46977 705 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TXNL4AP83876 142 aaKnown RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 ILF2Q12905 390 aaKnown RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 RALGDSQ12967 914 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 LRP8Q14114 963 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 DENND5AQ6IQ26 1287 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 ZNF280DQ6N043 979 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 HACD2Q6Y1H2 254 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 BEND5Q7L4P6 421 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 OTOP3Q7RTS5 596 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TRIM74Q86UV6 250 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TRIM73Q86UV7 250 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 CEP97Q8IW35 865 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 CHERPQ8IWX8 916 aaKnown RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 MYO1HQ8N1T3 1032 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 PNPLA1Q8N8W4 532 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 SMG8Q8ND04 991 aaKnown RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 SPPL2BQ8TCT7 592 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms