RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LRPAP1P30533 357 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 SCTRP47872 440 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 RAD23AP54725 363 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 MRPS35P82673 323 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ACSM2AQ08AH3 577 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 KPNB1Q14974 876 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TCEA2Q15560 299 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ATAD3BQ5T9A4 648 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ACSM2BQ68CK6 577 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TRAPPC5Q8IUR0 188 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 P3H2Q8IVL5 708 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ARHGEF4Q9NR80 690 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 FZD10Q9ULW2 581 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 RPL26L1Q9UNX3 145 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 CORO2BQ9UQ03 480 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 RAP2CQ9Y3L5 183 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 DNM1LO00429 736 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 CD3EAPO15446 510 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ZSCAN9O15535 394 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 USP1O94782 785 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PSMA3P25788 255 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PAGE2Q7Z2X7 111 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 YTHDF3Q7Z739 585 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TMEM132CQ8N3T6 1108 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ACTRT2Q8TDY3 377 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 SLCO2A1Q92959 643 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PHF21BQ96EK2 531 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 GAS2L1Q99501 681 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TSC22D3Q99576 134 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 MYO1GB0I1T2 1018 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 USP12O75317 370 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TARSP26639 723 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 JAG1P78504 1218 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 IFI35P80217 286 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 GAD2Q05329 585 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ASTE1Q2TB18 679 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PLPP4Q5VZY2 271 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ELMO1Q92556 727 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ACDQ96AP0 544 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 CEP295NLQ96MC4 621 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 MRPS17Q9Y2R5 130 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 VWA7Q9Y334 891 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 FCHO1O14526 889 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PAPSS1O43252 624 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 POP4O95707 220 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 C1RP00736 705 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 CCDC166P0CW27 439 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 GPR15P49685 360 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 FASTKQ14296 549 aaKnown RBP12.06□□□□□ -0.48
PTPRF-205ENST00000414879 GNA13Q14344 377 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 PTPRNQ16849 979 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TDRPQ86YL5 185 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 FNDC5Q8NAU1 212 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ZFP28Q8NHY6 868 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 ERVW-1Q9UQF0 538 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 FAM47E-STBD1D6RA91 191 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 CACNB4O00305 520 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 NR5A2O00482 541 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 IRF8Q02556 426 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 CRYMQ14894 314 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 RAB30Q15771 203 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF618Q5T7W0 954 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 LIPMQ5VYY2 423 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 RNF43Q68DV7 783 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 PACS1Q6VY07 963 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 UGT2B28Q9BY64 529 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 B3GNT5Q9BYG0 378 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 AGO3Q9H9G7 860 aaKnown RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 TRMT13Q9NUP7 481 aaKnown RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 PRMT5O14744 637 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 TGDSO95455 350 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 CCL14Q16627 93 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 KLHL35Q6PF15 583 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 DACT3Q96B18 629 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 BTBD10Q9BSF8 475 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 TCRBV9S1A1TA0A576 114 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 NT5C1B-RDH14C9J2C7 533 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF623O75123 536 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 NDUFS2O75306 463 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 SEC22BO75396 215 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 PIGNO95427 931 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 CALCAP01258 141 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 DNTTP04053 509 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 CTSEP14091 401 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 FAM98BQ52LJ0 330 aaKnown RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 TIGD5Q53EQ6 642 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 AADACL2Q6P093 401 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 BHLHB9Q6PI77 547 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 TSEN2Q8NCE0 465 aaKnown RBP12.05□□□□□ -0.48
PTPRF-205ENST00000414879 SLC44A1Q8WWI5 657 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 OSBPL1AQ9BXW6 950 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms