RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 MAPK13O15264 365 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 RFPL1O75677 317 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 IGLV3-25P01717 112 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 PDGFAP04085 211 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 ZSCAN22P10073 491 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-208ENST00000414711 CLPPQ16740 277 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-208ENST00000414711 EDRF1Q3B7T1 1238 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 DCAF12Q5T6F0 453 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 KRT39Q6A163 491 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 OGFOD3Q6PK18 319 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 LCLAT1Q6UWP7 414 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 NYAP1Q6ZVC0 841 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 DCAF4L2Q8NA75 395 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
CPNE1-208ENST00000414711 MARVELD3Q96A59 401 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 RBM15Q96T37 977 aaKnown RBP eCLIP15.97■□□□□ 0.156e-9■■■□□ 15.1
CPNE1-208ENST00000414711 HEPHQ9BQS7 1158 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 CHMP5Q9NZZ3 219 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 KLQ9UEF7 1012 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 VANGL2Q9ULK5 521 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 MORC2Q9Y6X9 1032 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-208ENST00000414711 PCNX1Q96RV3 2341 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 FBN3Q75N90 2809 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 PVALEFA0A1B0GWK0 134 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 PDXKO00764 312 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 SART1O43290 800 aaKnown RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 HNRNPRO43390 633 aaKnown RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 B4GAT1O43505 415 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 CLDN11O75508 207 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 TRUB2O95900 331 aaKnown RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 KRT13P13646 458 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 HTR1BP28222 390 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 CSTF2P33240 577 aaKnown RBP eCLIP15.96■□□□□ 0.152e-45■■■■■ 66.1
CPNE1-208ENST00000414711 PEX5P50542 639 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 CCNHP51946 323 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 OR1D5P58170 312 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 RAB15P59190 212 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 SRP54P61011 504 aaKnown RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 TRA2AQ13595 282 aaKnown RBP eCLIP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 AUHQ13825 339 aaKnown RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 IRF4Q15306 451 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 ANKS6Q68DC2 871 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 ENPP7Q6UWV6 458 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 FAM129CQ86XR2 697 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 NRSN1Q8IZ57 195 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 IQUBQ8NA54 791 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 TP53I13Q8NBR0 393 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 KIAA0895Q8NCT3 520 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 FBXL13Q8NEE6 735 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 FAM46DQ8NEK8 389 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 PDXPQ96GD0 296 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 HSFY1Q96LI6 401 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 TRIM62Q9BVG3 475 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-208ENST00000414711 ZDHHC6Q9H6R6 413 aa15.96■□□□□ 0.15
CPNE1-208ENST00000414711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.96■□□□□ 0.152e-10■□□□□ 11.3
CPNE1-208ENST00000414711 C16orf96A6NNT2 1141 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 TMEM110-MUSTN1A8MSY1 372 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 ZNF821O75541 412 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-208ENST00000414711 SORBS2O94875 1100 aaKnown RBP15.95■□□□□ 0.14
CPNE1-208ENST00000414711 RHOCP08134 193 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 MXI1P50539 228 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 PITX1P78337 314 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-208ENST00000414711 ABHD18Q0P651 414 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 NFATC4Q14934 902 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 FAM173BQ6P4H8 233 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 BEND5Q7L4P6 421 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 KDELC2Q7Z4H8 507 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 TAF8Q7Z7C8 310 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 TFAP2BQ92481 460 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 ARHGEF26Q96DR7 871 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 TEFMQ96QE5 360 aaKnown RBP15.95■□□□□ 0.14
CPNE1-208ENST00000414711 SLC29A3Q9BZD2 475 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 MAGEF1Q9HAY2 307 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 CYP4F12Q9HCS2 524 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 RAB20Q9NX57 234 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 TLK1Q9UKI8 766 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 CSMD2Q7Z408 3487 aa15.95■□□□□ 0.14
CPNE1-208ENST00000414711 B4E171 279 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 TM7SF2O76062 418 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 SLC2A3P11169 496 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 ALDH4A1P30038 563 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 GTF2H1P32780 548 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 GGCXP38435 758 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 TSPAN7P41732 249 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 DNA2P51530 1060 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 LIMK2P53671 638 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 PMS2P54278 862 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 CDH4P55283 916 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 ENPEPQ07075 957 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 STK4Q13043 487 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 CUL2Q13617 745 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 NADK2Q4G0N4 442 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 PRR30Q53SZ7 412 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-208ENST00000414711 KCTD16Q68DU8 428 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 SPECC1LQ69YQ0 1117 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 FAM186BQ8IYM0 893 aa15.94■□□□□ 0.14
CPNE1-208ENST00000414711 PCDH20Q8N6Y1 951 aaKnown RBP15.94■□□□□ 0.14
CPNE1-208ENST00000414711 RTP4Q96DX8 246 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms