RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 HERC6Q8IVU3 1022 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 SFTPA2Q8IWL1 248 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 SPATA5Q8NB90 893 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 GDPD5Q8WTR4 605 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 RAB40AQ8WXH6 277 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 CNOT9Q92600 299 aaKnown RBP5.44□□□□□ -1.54
ATG4C-204ENST00000414558 RPS6KC1Q96S38 1066 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 NFS1Q9Y697 457 aa5.44□□□□□ -1.54
ATG4C-204ENST00000414558 NOTCH4Q99466 2003 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 C17orf113A0A1B0GUU1 675 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 VWA3AA6NCI4 1184 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 KRT36O76013 467 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 BIRC2Q13490 618 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 EFR3AQ14156 821 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 SF3B4Q15427 424 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATG4C-204ENST00000414558 EDRF1Q3B7T1 1238 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 ZNF718Q3SXZ3 478 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 XKR9Q5GH70 373 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 RETSATQ6NUM9 610 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 CCDC129Q6ZRS4 1044 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 CPXM2Q8N436 756 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 RFWD2Q8NHY2 731 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 COG8Q96MW5 612 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 LRFN5Q96NI6 719 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 CD180Q99467 661 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 LMAN2LQ9H0V9 348 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 ALKBH4Q9NXW9 302 aa5.43□□□□□ -1.54
ATG4C-204ENST00000414558 ARHGAP10A1A4S6 786 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 TYW5A2RUC4 315 aaKnown RBP5.42□□□□□ -1.54
ATG4C-204ENST00000414558 SH2D7A6NKC9 451 aaPredicted RBP5.42□□□□□ -1.54
ATG4C-204ENST00000414558 TSPAN3O60637 253 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 TCEA3O75764 348 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 LDHAP00338 332 aaKnown RBP5.42□□□□□ -1.54
ATG4C-204ENST00000414558 ZNF8P17098 575 aaPredicted RBP5.42□□□□□ -1.54
ATG4C-204ENST00000414558 FAM76BQ5HYJ3 339 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 RFLNBQ8N5W9 214 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 ZNF114Q8NC26 417 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 TBC1D20Q96BZ9 403 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 MTBPQ96DY7 904 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATG4C-204ENST00000414558 EPHX3Q9H6B9 360 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 GAREM1Q9H706 876 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 NDRG3Q9UGV2 375 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 PCDHGB5Q9Y5G0 923 aa5.42□□□□□ -1.54
ATG4C-204ENST00000414558 CKAP5Q14008 2032 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 FAM90A7PA6NKC0 464 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 FAM90A22PA8MWA6 464 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 FAM90A12PA8MX19 464 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 FAM90A23PA8MXZ1 464 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 KLK10O43240 276 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 BUB3O43684 328 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 CEP104O60308 925 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 ATP2C2O75185 946 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 GAGE7O76087 117 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 DDNO94850 711 aaPredicted RBP5.41□□□□□ -1.54
ATG4C-204ENST00000414558 GAGE12FP0CL80 117 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 GAGE12GP0CL81 117 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 GAGE12IP0CL82 117 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 IGHV4-30-4P0DP06 118 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 HDAC4P56524 1084 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
ATG4C-204ENST00000414558 YWHAZP63104 245 aaKnown RBP5.41□□□□□ -1.54
ATG4C-204ENST00000414558 ECT2LQ008S8 904 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 GAGE1Q13065 139 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 GAGE4Q13068 117 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 CALCRLQ16602 461 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 FBXO47Q5MNV8 452 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 LURAP1LQ8IV03 231 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 NKAPQ8N5F7 415 aaKnown RBP5.41□□□□□ -1.54
ATG4C-204ENST00000414558 BICD1Q96G01 975 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 CLSTN3Q9BQT9 956 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 PYM1Q9BRP8 204 aaKnown RBP5.41□□□□□ -1.54
ATG4C-204ENST00000414558 MROH8Q9H579 483 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 MALT1Q9UDY8 824 aa5.41□□□□□ -1.54
ATG4C-204ENST00000414558 SAA2-SAA4A0A096LPE2 208 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 MAGEA13PA6NCF6 341 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 PER2O15055 1255 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 NBNO60934 754 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 PCNAP12004 261 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 PTPN2P17706 415 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 RYKP34925 604 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 DLX5P56178 289 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 DDR1Q08345 913 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 DLG1Q12959 904 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 RUNX2Q13950 521 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 DHX34Q14147 1143 aaKnown RBP5.4□□□□□ -1.54
ATG4C-204ENST00000414558 ZRSR1Q15695 479 aaKnown RBP5.4□□□□□ -1.54
ATG4C-204ENST00000414558 RHBDF2Q6PJF5 856 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 SHFQ7M4L6 423 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 SUGP1Q8IWZ8 645 aaKnown RBP5.4□□□□□ -1.54
ATG4C-204ENST00000414558 PGBD5Q8N414 524 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 ARRDC2Q8TBH0 407 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 WFIKKN2Q8TEU8 576 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 NR4A3Q92570 626 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 OR1F2PQ96R84 312 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 TWNKQ96RR1 684 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 TAOK3Q9H2K8 898 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 ITM2CQ9NQX7 267 aa5.4□□□□□ -1.54
ATG4C-204ENST00000414558 ADGRF5Q8IZF2 1346 aa5.4□□□□□ -1.55
ATG4C-204ENST00000414558 CBY3A6NI87 242 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms