RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 NSMCE3Q96MG7 304 aa26.62■■□□□ 1.85
VEGFA-207ENST00000413642 KLF6Q99612 283 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-207ENST00000413642 CPEB1Q9BZB8 566 aaKnown RBP26.62■■□□□ 1.85
VEGFA-207ENST00000413642 APOBEC2Q9Y235 224 aaKnown RBP26.62■■□□□ 1.85
VEGFA-207ENST00000413642 MMP20O60882 483 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 TRIM16O95361 564 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 IL4RP24394 825 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 IL10RBQ08334 325 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 SGCGQ13326 291 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 CCDC157Q569K6 752 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 TMCO3Q6UWJ1 677 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 Q6ZSR6 202 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 KANSL1Q7Z3B3 1105 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 SRLQ86TD4 932 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 ZSWIM9Q86XI8 627 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 SLC22A18ASQ8N1D0 253 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 ADAMTS14Q8WXS8 1223 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 TSC1Q92574 1164 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 TMEM121BQ9BXQ6 578 aaPredicted RBP26.61■■□□□ 1.85
VEGFA-207ENST00000413642 DEF6Q9H4E7 631 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 SUV39H2Q9H5I1 410 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 SPTLC3Q9NUV7 552 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 ZNHIT6Q9NWK9 470 aaKnown RBP26.61■■□□□ 1.85
VEGFA-207ENST00000413642 DKK3Q9UBP4 350 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 DOCK9Q9BZ29 2069 aa26.61■■□□□ 1.85
VEGFA-207ENST00000413642 SSU72P8A0A1W2PR75 194 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 TTC24A2A3L6 582 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-207ENST00000413642 AKR1B10O60218 316 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 PROSCO94903 275 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 PRKCGP05129 697 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 H2AFZP0C0S5 128 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 CDH6P55285 790 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 TAS2R40P59535 323 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 SEMG2Q02383 582 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 SLC10A7Q0GE19 358 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 KRT81Q14533 505 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 ZNF542PQ5EBM4 170 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 H2AFVQ71UI9 128 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 PTAR1Q7Z6K3 402 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-207ENST00000413642 LZTR1Q8N653 840 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 CTNNBL1Q8WYA6 563 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-207ENST00000413642 WRAP53Q9BUR4 548 aaKnown RBP26.6■■□□□ 1.85
VEGFA-207ENST00000413642 CINPQ9BW66 212 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-207ENST00000413642 KLHL11Q9NVR0 708 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 FTSJ1Q9UET6 329 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 HS3ST3A1Q9Y663 406 aa26.6■■□□□ 1.85
VEGFA-207ENST00000413642 TMEM110-MUSTN1A8MSY1 372 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 YKT6O15498 198 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 TNFSF14O43557 240 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 ARSEP51690 589 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 TPRG1LQ5T0D9 272 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 OXR1Q8N573 874 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 NHEJ1Q9H9Q4 299 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-207ENST00000413642 NEUROG3Q9Y4Z2 214 aa26.59■■□□□ 1.85
VEGFA-207ENST00000413642 A6NNZ2 444 aa26.58■■□□□ 1.85
VEGFA-207ENST00000413642 PEX11BO96011 259 aa26.58■■□□□ 1.85
VEGFA-207ENST00000413642 TPM1P09493 284 aa26.58■■□□□ 1.85
VEGFA-207ENST00000413642 TBX2Q13207 712 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-207ENST00000413642 TSR1Q2NL82 804 aaKnown RBP26.58■■□□□ 1.85
VEGFA-207ENST00000413642 INAVAQ3KP66 663 aa26.58■■□□□ 1.85
VEGFA-207ENST00000413642 UCKL1Q9NWZ5 548 aa26.58■■□□□ 1.85
VEGFA-207ENST00000413642 UVRAGQ9P2Y5 699 aa26.58■■□□□ 1.85
VEGFA-207ENST00000413642 TSPAN11A1L157 253 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 DKK1O94907 266 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 TMEM253P0C7T8 217 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 XPAP23025 273 aaPredicted RBP26.57■■□□□ 1.84
VEGFA-207ENST00000413642 CSNK1DP48730 415 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 DNAJC3Q13217 504 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 LBRQ14739 615 aaKnown RBP26.57■■□□□ 1.84
VEGFA-207ENST00000413642 HADHQ16836 314 aaKnown RBP26.57■■□□□ 1.84
VEGFA-207ENST00000413642 UGP2Q16851 508 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 UNQ6494/PRO21346Q6UXR6 183 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 KYAT3Q6YP21 454 aaKnown RBP26.57■■□□□ 1.84
VEGFA-207ENST00000413642 MARCH9Q86YJ5 346 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 SLC25A45Q8N413 288 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 FAM71BQ8TC56 605 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 CXorf40AQ8TE69 158 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 GATA6Q92908 595 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 CNDP2Q96KP4 475 aaKnown RBP26.57■■□□□ 1.84
VEGFA-207ENST00000413642 LENG8Q96PV6 779 aaPredicted RBP26.57■■□□□ 1.84
VEGFA-207ENST00000413642 PCDH12Q9NPG4 1184 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 MSRB2Q9Y3D2 182 aa26.57■■□□□ 1.84
VEGFA-207ENST00000413642 CABIN1Q9Y6J0 2220 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 FPGTO14772 594 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 MAFKO60675 156 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 LDOC1O95751 146 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-207ENST00000413642 SCNN1BP51168 640 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 DPYSL3Q14195 570 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 RFTN1Q14699 578 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-207ENST00000413642 TMEM52BQ4KMG9 183 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 TMCO4Q5TGY1 634 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 PGBD5Q8N414 524 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 ASB12Q8WXK4 309 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 CENPTQ96BT3 561 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 CCDC42Q96M95 316 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 ZNF641Q96N77 438 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-207ENST00000413642 TUBGCP5Q96RT8 1024 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 MBNL1Q9NR56 388 aaKnown RBP26.56■■□□□ 1.84
VEGFA-207ENST00000413642 GPR27Q9NS67 375 aa26.56■■□□□ 1.84
VEGFA-207ENST00000413642 COQ6Q9Y2Z9 468 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms