RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PAK4O96013 591 aaPredicted RBP14.98□□□□□ -0.01
LIMS4-201ENST00000413601 KRT7P08729 469 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 HNRNPA2B1P22626 353 aaKnown RBP14.98□□□□□ -0.01
LIMS4-201ENST00000413601 PMLP29590 882 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 AKT2P31751 481 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 SERPINB6P35237 376 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 ARHGAP25P42331 645 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 CSNK1DP48730 415 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 CLDN2P57739 230 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 RFTN1Q14699 578 aaPredicted RBP14.98□□□□□ -0.01
LIMS4-201ENST00000413601 LBRQ14739 615 aaKnown RBP14.98□□□□□ -0.01
LIMS4-201ENST00000413601 GRM3Q14832 879 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 SUZ12Q15022 739 aaKnown RBP14.98□□□□□ -0.01
LIMS4-201ENST00000413601 PDK2Q15119 407 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 SHBQ15464 509 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 TRIP6Q15654 476 aaKnown RBP14.98□□□□□ -0.01
LIMS4-201ENST00000413601 ANKRD20A8PQ5CZ79 823 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 ZFYVE27Q5T4F4 411 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 CAMK1DQ8IU85 385 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 RHOT2Q8IXI1 618 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 PCDH19Q8TAB3 1148 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 RHBDD1Q8TEB9 315 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 RFFLQ8WZ73 363 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 ZNF599Q96NL3 588 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 SUV39H2Q9H5I1 410 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 PCOLCE2Q9UKZ9 415 aa14.98□□□□□ -0.01
LIMS4-201ENST00000413601 COL5A1P20908 1838 aaPredicted RBP14.97□□□□□ -0.01
LIMS4-201ENST00000413601 PTPRBP23467 1997 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 TTC24A2A3L6 582 aaPredicted RBP14.97□□□□□ -0.01
LIMS4-201ENST00000413601 RAD51BO15315 384 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 FLRT2O43155 660 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 MFSD11O43934 449 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 MAGEC1O60732 1142 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 MTA2O94776 668 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 PEX11BO96011 259 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 THEGLP0DJG4 465 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 SCNN1BP51168 640 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 NSUN2Q08J23 767 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIMS4-201ENST00000413601 OVGP1Q12889 678 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 FOXC1Q12948 553 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 SGCGQ13326 291 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 HNRNPDQ14103 355 aaKnown RBP14.97□□□□□ -0.01
LIMS4-201ENST00000413601 TMCO4Q5TGY1 634 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 GCNT7Q6ZNI0 430 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 GATAD2AQ86YP4 633 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 MAP7D3Q8IWC1 876 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 ATPAF2Q8N5M1 289 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 HCAR2Q8TDS4 363 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 ZNF641Q96N77 438 aaPredicted RBP14.97□□□□□ -0.01
LIMS4-201ENST00000413601 TUBGCP5Q96RT8 1024 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 C1QTNF2Q9BXJ5 285 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 ERVMER34-1Q9H9K5 563 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 SEPT3Q9UH03 358 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 INTUQ9ULD6 942 aa14.97□□□□□ -0.01
LIMS4-201ENST00000413601 POM121BA6NF01 834 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 MMP20O60882 483 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 MAP3K6O95382 1288 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 XPAP23025 273 aaPredicted RBP14.96□□□□□ -0.01
LIMS4-201ENST00000413601 KDELR1P24390 212 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 SERPINA4P29622 427 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 MAGEA1P43355 309 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 ARRB1P49407 418 aaPredicted RBP14.96□□□□□ -0.01
LIMS4-201ENST00000413601 RENBPP51606 427 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 ZNF235Q14590 738 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 PAFAH1B3Q15102 231 aaKnown RBP14.96□□□□□ -0.01
LIMS4-201ENST00000413601 UGP2Q16851 508 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 CFAP58Q5T655 872 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 NCBP2-AS2Q69YL0 99 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 ZSWIM9Q86XI8 627 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 PGBD5Q8N414 524 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 OR13H1Q8NG92 308 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 BAHD1Q8TBE0 780 aaPredicted RBP14.96□□□□□ -0.01
LIMS4-201ENST00000413601 RAPGEF5Q92565 580 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 BMFQ96LC9 184 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 NSMCE3Q96MG7 304 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 PSKH2Q96QS6 385 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 KLF6Q99612 283 aaPredicted RBP14.96□□□□□ -0.01
LIMS4-201ENST00000413601 ZNF670Q9BS34 389 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 WRAP53Q9BUR4 548 aaKnown RBP14.96□□□□□ -0.01
LIMS4-201ENST00000413601 ATP13A3Q9H7F0 1226 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 HYOU1Q9Y4L1 999 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 HS3ST3A1Q9Y663 406 aa14.96□□□□□ -0.01
LIMS4-201ENST00000413601 NCOR2Q9Y618 2525 aa14.96□□□□□ -0.02
LIMS4-201ENST00000413601 TSPAN11A1L157 253 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 A6NNZ2 444 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 LCA5LO95447 670 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 TOP3BO95985 862 aaKnown RBP14.95□□□□□ -0.02
LIMS4-201ENST00000413601 PRKCGP05129 697 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 SEMG2Q02383 582 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 BCL2L1Q07817 233 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 BNIP3Q12983 259 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 TCEAL1Q15170 157 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 BRAT1Q6PJG6 821 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 Q6ZSR6 202 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 ABI3BPQ7Z7G0 1075 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 ZSCAN30Q86W11 494 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 CCDC170Q8IYT3 715 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 PQLC3Q8N755 202 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 CXorf40AQ8TE69 158 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 SAP25Q8TEE9 199 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms