RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 KCNK5O95279 499 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 PAK4O96013 591 aaPredicted RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 SERPINB6P35237 376 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 CTSKP43235 329 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 ZNF235Q14590 738 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 PAFAH1B3Q15102 231 aaKnown RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 TCEAL1Q15170 157 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 TMEM259Q4ZIN3 620 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 SETMARQ53H47 684 aaPredicted RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 TMCO4Q5TGY1 634 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 B4GALNT4Q76KP1 1039 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 FEM1CQ96JP0 617 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 RNF157Q96PX1 679 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 BAG1Q99933 345 aaPredicted RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 DESI2Q9BSY9 194 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 WRAP53Q9BUR4 548 aaKnown RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 OSBPL1AQ9BXW6 950 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 ZDHHC5Q9C0B5 715 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 SUV39H2Q9H5I1 410 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 DNAAF2Q9NVR5 837 aaKnown RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 SEPT3Q9UH03 358 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 ALG6Q9Y672 507 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 PLXNA2O75051 1894 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 CNOT1A5YKK6 2376 aaKnown RBP13.28□□□□□ -0.28
SSB-203ENST00000413002 GOLGA8CPA6NN73 597 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 TLR4O00206 839 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 RAD51BO15315 384 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 MMP20O60882 483 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 CER1O95813 267 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 XPAP23025 273 aaPredicted RBP13.28□□□□□ -0.28
SSB-203ENST00000413002 CDC25BP30305 580 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 MARCKSL1P49006 195 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 DYNLT1P63172 113 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 FAM193AP78312 1265 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 GALNT2Q10471 571 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 RFTN1Q14699 578 aaPredicted RBP13.28□□□□□ -0.28
SSB-203ENST00000413002 STAT4Q14765 748 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 NEK5Q6P3R8 708 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 SPATS2Q86XZ4 545 aaKnown RBP13.28□□□□□ -0.28
SSB-203ENST00000413002 RHOT1Q8IXI2 618 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 PAF1Q8N7H5 531 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 ZNF599Q96NL3 588 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 PSKH2Q96QS6 385 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 SLC17A9Q9BYT1 436 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 LACRTQ9GZZ8 138 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 TM7SF3Q9NS93 570 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 HEY1Q9Y5J3 304 aa13.28□□□□□ -0.28
SSB-203ENST00000413002 ASCC3Q8N3C0 2202 aaKnown RBP13.27□□□□□ -0.28
SSB-203ENST00000413002 CACNA1EQ15878 2313 aa13.27□□□□□ -0.28
SSB-203ENST00000413002 SPAARA0A1B0GVQ0 90 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 A8MX80 341 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 PRAMEF26H0Y7S4 382 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 AREL1O15033 823 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 AP1G1O43747 822 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 KRT10P13645 584 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.29
SSB-203ENST00000413002 SLC1A1P43005 524 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 MMP13P45452 471 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 CSNK1DP48730 415 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 NAP1L1P55209 391 aaKnown RBP13.27□□□□□ -0.29
SSB-203ENST00000413002 NXPH1P58417 271 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 RPS21P63220 83 aaKnown RBP13.27□□□□□ -0.29
SSB-203ENST00000413002 BCL2L1Q07817 233 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 ITKQ08881 620 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 ODF2Q5BJF6 829 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 N4BP2L1Q5TBK1 243 aaPredicted RBP13.27□□□□□ -0.29
SSB-203ENST00000413002 MARC1Q5VT66 337 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 IL27RAQ6UWB1 636 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 ERMP1Q7Z2K6 904 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 PIP4P1Q86T03 277 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 GATAD2AQ86YP4 633 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 RFX6Q8HWS3 928 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 PLD5Q8N7P1 536 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 CCNYQ8ND76 341 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 OR13H1Q8NG92 308 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.27□□□□□ -0.29
SSB-203ENST00000413002 LGMNQ99538 433 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 ATP13A3Q9H7F0 1226 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 NOD2Q9HC29 1040 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 PCDH12Q9NPG4 1184 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 DTLQ9NZJ0 730 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 DKK3Q9UBP4 350 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 TRIM10Q9UDY6 481 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 DMTF1Q9Y222 760 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 BTBD3Q9Y2F9 522 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 COQ6Q9Y2Z9 468 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 PCDHGC4Q9Y5F7 938 aa13.27□□□□□ -0.29
SSB-203ENST00000413002 POM121BA6NF01 834 aa13.26□□□□□ -0.29
SSB-203ENST00000413002 UPK3BL1B0FP48 263 aa13.26□□□□□ -0.29
SSB-203ENST00000413002 UPK3BL2E5RIL1 263 aa13.26□□□□□ -0.29
SSB-203ENST00000413002 TSPAN6O43657 245 aa13.26□□□□□ -0.29
SSB-203ENST00000413002 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
SSB-203ENST00000413002 THEGLP0DJG4 465 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms