RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TBC1D3LB9A6J9 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 MATN3O15232 486 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 NRDCO43847 1150 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 GDF9O60383 454 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 RNGTTO60942 597 aaKnown RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3HP0C7X1 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ADRB3P13945 408 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 CCNB1P14635 433 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 MX2P20592 715 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TGM2P21980 687 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 CCNCP24863 283 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 NEK3P51956 506 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 OTUD4Q01804 1114 aaKnown RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ITKQ08881 620 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 NIPAL4Q0D2K0 466 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 AP1B1Q10567 949 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TRAF2Q12933 501 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 HNRNPDQ14103 355 aaKnown RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TFDP2Q14188 446 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 PTPRRQ15256 657 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF805Q5CZA5 627 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 SEL1L3Q68CR1 1132 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3GQ6DHY5 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3CQ6IPX1 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TIGD7Q6NT04 549 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 FBXL19Q6PCT2 694 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 KDM7AQ6ZMT4 941 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF662Q6ZS27 426 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 BBS12Q6ZW61 710 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 REXO1L1PQ8IX06 675 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 KIAA2013Q8IYS2 634 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3Q8IZP1 549 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 CNTD1Q8N815 330 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 CADM4Q8NFZ8 388 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 OR2T34Q8NGX1 318 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 NSMCE1Q8WV22 266 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ANP32BQ92688 251 aaKnown RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 HES6Q96HZ4 224 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 PPP1R16AQ96I34 528 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 SLC6A18Q96N87 628 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF599Q96NL3 588 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TSGA13Q96PP4 275 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 SMIM14Q96QK8 99 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 SEMA3CQ99985 751 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 OSBPL1AQ9BXW6 950 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 SUV39H2Q9H5I1 410 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 NOD2Q9HC29 1040 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 FZD3Q9NPG1 666 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 DYRK4Q9NR20 520 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 RBM22Q9NW64 420 aaKnown RBP eCLIP7.8□□□□□ -1.162e-6■■□□□ 13.7
CPSF4-202ENST00000412686 TRMT1Q9NXH9 659 aaKnown RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 SEPT10Q9P0V9 454 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 ZFR2Q9UPR6 939 aaKnown RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 CA5BQ9Y2D0 317 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 PCDHGC4Q9Y5F7 938 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 FADS3Q9Y5Q0 445 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TP53BP1Q12888 1972 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 PCDH15Q96QU1 1955 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 LRRK1Q38SD2 2015 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 MYO15AQ9UKN7 3530 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 A0A0U1RQS6 177 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 A0A1W2PQU0 124 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 LRRC72A6NJI9 287 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 MIF4GDA9UHW6 222 aaKnown RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 F5H423 210 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 SLC7A4O43246 635 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PCDH8O95206 1070 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 JCHAINP01591 159 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 CFIP05156 583 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 TIMP2P16035 220 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PRLRP16471 622 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 ZFXP17010 805 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PTPN3P26045 913 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 CSNK1DP48730 415 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 IRX4P78413 519 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 IFI35P80217 286 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 RAD51Q06609 339 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 FGL2Q14314 439 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PDK1Q15118 436 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PRKD1Q15139 912 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 NOMO1Q15155 1222 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 KCTD19Q17RG1 926 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 TRIM61Q5EBN2 209 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 SPDYCQ5MJ68 293 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 MEI1Q5TIA1 1274 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PRR23CQ6ZRP0 262 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 TTC7BQ86TV6 843 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 SYT12Q8IV01 421 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 UBL4BQ8N7F7 174 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 OR2I1PQ8NGU4 316 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 C1orf216Q8TAB5 229 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 ARRDC2Q8TBH0 407 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 ACTL9Q8TC94 416 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 PDCD6IPQ8WUM4 868 aaKnown RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 DNASE2BQ8WZ79 361 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 P3H4Q92791 437 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 FOXJ1Q92949 421 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms