RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 MLPHQ9BV36 600 aaPredicted RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 COG4Q9H9E3 785 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 PCDHGA3Q9Y5H0 932 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 AP2A1O95782 977 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 CHRNGP07510 517 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 SCNN1AP37088 669 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 ACADVLP49748 655 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 COPAP53621 1224 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 DNAL1Q4LDG9 190 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 SPANXN3Q5MJ09 141 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 GRTP1Q5TC63 336 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 DEFB107AQ8IZN7 70 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 URGCPQ8TCY9 931 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 ACMSDQ8TDX5 336 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 BPTFQ12830 3046 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 CNOT3O75175 753 aaKnown RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 AXLP30530 894 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 SERPINB6P35237 376 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 MSX2P35548 267 aaPredicted RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 CCT8P50990 548 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 SPIDRQ14159 915 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 E2F2Q14209 437 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 SLC9B1Q4ZJI4 515 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 NXNQ6DKJ4 435 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 C11orf74Q86VG3 221 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 SCAMP5Q8TAC9 235 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 GTF3C2Q8WUA4 911 aaPredicted RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 IGSF9Q9P2J2 1179 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 RSL24D1Q9UHA3 163 aaKnown RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 FBXW11Q9UKB1 542 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 PLA2G4CQ9UP65 541 aa16.86■□□□□ 0.29
PDK1-203ENST00000410055 GNEQ9Y223 722 aaKnown RBP16.86■□□□□ 0.29
PDK1-203ENST00000410055 ANKRD34BA5PLL1 514 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 F8W8V4 182 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 MAGEC1O60732 1142 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 B3GAT3O94766 335 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 THP07101 528 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 BRCC3P46736 316 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 RPL34P49207 117 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 CTBP1Q13363 440 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 KCNJ8Q15842 424 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 NET1Q7Z628 596 aaPredicted RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 NT5C3BQ969T7 300 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 ST3GAL5Q9UNP4 418 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 ZCWPW2A0A1B0GU75 182 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 NR4A1P22736 598 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 CRYBB1P53674 252 aaPredicted RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 PDAP1Q13442 181 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 TUBB3Q13509 450 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 USP10Q14694 798 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 GRM3Q14832 879 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 FXNQ16595 210 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 CYP2A13Q16696 494 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 TRMT5Q32P41 509 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 CCSAPQ6IQ19 270 aaPredicted RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 LPCAT2Q7L5N7 544 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 MAPK15Q8TD08 544 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 VPS39Q96JC1 886 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 MARK4Q96L34 752 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 PARK7Q99497 189 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 OMDQ99983 421 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 NMRAL1Q9HBL8 299 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 S100A14Q9HCY8 104 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 EIF2B3Q9NR50 452 aaKnown RBP16.85■□□□□ 0.29
PDK1-203ENST00000410055 ZDHHC7Q9NXF8 308 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 GTF2IRD1Q9UHL9 959 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 TLK1Q9UKI8 766 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
PDK1-203ENST00000410055 AIM2O14862 343 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 PMPCBO75439 489 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 NELFEP18615 380 aaKnown RBP16.84■□□□□ 0.29
PDK1-203ENST00000410055 GRK2P25098 689 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 RAP1GDS1P52306 607 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 CACNB2Q08289 660 aaPredicted RBP16.84■□□□□ 0.29
PDK1-203ENST00000410055 HPS6Q86YV9 775 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 SLC2A13Q96QE2 648 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 CDY2AQ9Y6F7 541 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 A0A088AWK7 358 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 KDM1AO60341 852 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 HOXD8P13378 290 aaPredicted RBP16.84■□□□□ 0.29
PDK1-203ENST00000410055 MPSTP25325 297 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 LIMK2P53671 638 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 EGFLAMQ63HQ2 1017 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 FRMD7Q6ZUT3 714 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 ERI1Q8IV48 349 aaKnown RBP16.84■□□□□ 0.29
PDK1-203ENST00000410055 DENND6AQ8IWF6 608 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 CCNYL1Q8N7R7 359 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 OR52B2Q96RD2 323 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 SLC39A3Q9BRY0 314 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 SFMBT1Q9UHJ3 866 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 ZSWIM8A7E2V4 1837 aa16.84■□□□□ 0.29
PDK1-203ENST00000410055 J3QRK9 145 aa16.83■□□□□ 0.29
PDK1-203ENST00000410055 M0QZ92 97 aa16.83■□□□□ 0.29
PDK1-203ENST00000410055 MSI1O43347 362 aaKnown RBP16.83■□□□□ 0.29
PDK1-203ENST00000410055 KLHL2O95198 593 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms