RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NDNQ99608 321 aa16.85■□□□□ 0.29
LIMS2-208ENST00000410011 CATSPERBQ9H7T0 1116 aa16.85■□□□□ 0.29
LIMS2-208ENST00000410011 IGSF5Q9NSI5 407 aa16.85■□□□□ 0.29
LIMS2-208ENST00000410011 FBXO5Q9UKT4 447 aa16.85■□□□□ 0.29
LIMS2-208ENST00000410011 G3BP2Q9UN86 482 aaKnown RBP16.85■□□□□ 0.29
LIMS2-208ENST00000410011 SHROOM3Q8TF72 1996 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-208ENST00000410011 RABGGTBP53611 331 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 PSME3P61289 254 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 SULT2A1Q06520 285 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 LRP8Q14114 963 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 TECRLQ5HYJ1 363 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 AGAP9Q5VTM2 703 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 AFMIDQ63HM1 303 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 HACD2Q6Y1H2 254 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 ANKRD23Q86SG2 305 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 IPMKQ8NFU5 416 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 NPLOC4Q8TAT6 608 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 CALML6Q8TD86 181 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-208ENST00000410011 FICDQ9BVA6 458 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 POMKQ9H5K3 350 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 ACSS2Q9NR19 701 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 FNIP2Q9P278 1114 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 THP07101 528 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 RBP1P09455 135 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 FAM58BPP0C7Q3 252 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 ZNF26P17031 533 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-208ENST00000410011 SLC12A2P55011 1212 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 RHDQ02161 417 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 ILF2Q12905 390 aaKnown RBP16.84■□□□□ 0.29
LIMS2-208ENST00000410011 APOFQ13790 326 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 NEPROQ6NW34 567 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 ELMO2Q96JJ3 720 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 NPAS2Q99743 824 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 OMDQ99983 421 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 TRMOQ9BU70 441 aa16.84■□□□□ 0.29
LIMS2-208ENST00000410011 DFFAO00273 331 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 TRIM24O15164 1050 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 VILLO15195 856 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 IPO13O94829 963 aaKnown RBP16.83■□□□□ 0.28
LIMS2-208ENST00000410011 CPB1P15086 417 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 SLC26A3P40879 764 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 LEPRP48357 1165 aaKnown RBP16.83■□□□□ 0.28
LIMS2-208ENST00000410011 MYBPC1Q00872 1141 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 ZNF460Q14592 562 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 PPP2R5DQ14738 602 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 ARTNQ5T4W7 220 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 CNSTQ6PJW8 725 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 ARHGAP36Q6ZRI8 547 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 SLC22A9Q8IVM8 553 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 RNF34Q969K3 372 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 ZNF419Q96HQ0 510 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-208ENST00000410011 UHRF1Q96T88 793 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-208ENST00000410011 ACBD6Q9BR61 282 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 RBM38Q9H0Z9 239 aaKnown RBP16.83■□□□□ 0.28
LIMS2-208ENST00000410011 TBC1D13Q9NVG8 400 aa16.83■□□□□ 0.28
LIMS2-208ENST00000410011 STX16-NPEPL1H3BU86 382 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 IRAK2O43187 625 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 RNASEH2AO75792 299 aaKnown RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 PAPSS2O95340 614 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 PGM3O95394 542 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 ATP4BP51164 291 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 CLCN5P51795 746 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 RPS6KA3P51812 740 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 PGGT1BP53609 377 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 NRG1Q02297 640 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 ACAP2Q15057 778 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 RWDD4Q6NW29 188 aaKnown RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 FATE1Q969F0 183 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 TMA16Q96EY4 203 aaKnown RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 TSPAN17Q96FV3 270 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 MRGPRX2Q96LB1 330 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 CACNA2D2Q9NY47 1150 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 AP4S1Q9Y587 144 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 C17orf102A2RUQ5 167 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 MSX2P35548 267 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 ACADVLP49748 655 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 CLCNKBP51801 687 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 BTBD8Q5XKL5 378 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 ZNF470Q6ECI4 717 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 C8orf82Q6P1X6 216 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 CTU1Q7Z7A3 348 aaKnown RBP16.82■□□□□ 0.28
LIMS2-208ENST00000410011 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 UBXN10Q96LJ8 280 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 ZNF597Q96LX8 424 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 KATNAL1Q9BW62 490 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 SLC39A8Q9C0K1 460 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 TRPV6Q9H1D0 765 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 OSER1Q9NX31 292 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 CD300AQ9UGN4 299 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 SLC2A6Q9UGQ3 507 aa16.82■□□□□ 0.28
LIMS2-208ENST00000410011 CCDC78A2IDD5 438 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 HEATR9A2RTY3 570 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 WASH4PA8MWX3 477 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms