RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PSMA2P25787 234 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 NDST2P52849 883 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 YPEL5P62699 121 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 SEMG2Q02383 582 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 MAMLD1Q13495 774 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 ANO6Q4KMQ2 910 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 BAP1Q92560 729 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 DCBLD2Q96PD2 775 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 SYT11Q9BT88 431 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
CBX3-203ENST00000409747 AP4E1Q9UPM8 1137 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 MYLKQ15746 1914 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 RRP8O43159 456 aaKnown RBP14.92□□□□□ -0.02
CBX3-203ENST00000409747 AQP9O43315 295 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 MT-CO3P00414 261 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 JUNDP17535 347 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 ABCG1P45844 678 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 ASIC2Q16515 512 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 CFAP58Q5T655 872 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 PLEKHA7Q6IQ23 1121 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 LRRC69Q6ZNQ3 347 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 VPS36Q86VN1 386 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 VOPP1Q96AW1 172 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 CENPTQ96BT3 561 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 TBATAQ96M53 351 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 DEPDC7Q96QD5 511 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 KLC2Q9H0B6 622 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 LRRC19Q9H756 370 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 SPASTQ9UBP0 616 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 LHX3Q9UBR4 397 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 TDRD6O60522 2096 aaKnown RBP14.91□□□□□ -0.02
CBX3-203ENST00000409747 KNTC1P50748 2209 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 LOC400499M0QZD8 3231 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 ARHGAP42A6NI28 874 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 LRRC53A6NM62 1247 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 TMCO5BA8MYB1 307 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 EEF2KO00418 725 aaKnown RBP14.91□□□□□ -0.02
CBX3-203ENST00000409747 TPP1O14773 563 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 TEX33O43247 280 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 RNF8O76064 485 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 ZNF135P52742 658 aaPredicted RBP14.91□□□□□ -0.02
CBX3-203ENST00000409747 OGDHQ02218 1023 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 KDM7AQ6ZMT4 941 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 FNIP1Q8TF40 1166 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 GLMNQ92990 594 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 TRIM11Q96F44 468 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 ZNF641Q96N77 438 aaPredicted RBP14.91□□□□□ -0.02
CBX3-203ENST00000409747 IL12RB2Q99665 862 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 ABCG4Q9H172 646 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 DHX35Q9H5Z1 703 aaKnown RBP14.91□□□□□ -0.02
CBX3-203ENST00000409747 PDFQ9HBH1 243 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 TAS2R14Q9NYV8 317 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 APOBEC3BQ9UH17 382 aaKnown RBP14.91□□□□□ -0.02
CBX3-203ENST00000409747 SALL4Q9UJQ4 1053 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 SCINQ9Y6U3 715 aa14.91□□□□□ -0.02
CBX3-203ENST00000409747 A0A1W2PQC6 194 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 DAPK3O43293 454 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 OPA1O60313 960 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 PRAMEF11O60813 436 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 MMP20O60882 483 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 NEBLO76041 1014 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 GZMAP12544 262 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 ACTN2P35609 894 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 IGFALSP35858 605 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 TMEM52BQ4KMG9 183 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 LRRC73Q5JTD7 316 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 ERMARDQ5T6L9 678 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 ERAP2Q6P179 960 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 BRAT1Q6PJG6 821 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 MACC1Q6ZN28 852 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 PSTKQ8IV42 348 aaKnown RBP14.9□□□□□ -0.02
CBX3-203ENST00000409747 SNIP1Q8TAD8 396 aaKnown RBP14.9□□□□□ -0.02
CBX3-203ENST00000409747 IFI44Q8TCB0 444 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 LMX1AQ8TE12 382 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 EXOC2Q96KP1 924 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 TUBGCP5Q96RT8 1024 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 WRAP53Q9BUR4 548 aaKnown RBP14.9□□□□□ -0.02
CBX3-203ENST00000409747 SLC13A1Q9BZW2 595 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 TMEM63CQ9P1W3 806 aa14.9□□□□□ -0.02
CBX3-203ENST00000409747 URB1O60287 2271 aaKnown RBP14.9□□□□□ -0.02
CBX3-203ENST00000409747 TSPAN11A1L157 253 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 PRPSAP2O60256 369 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 BRINP1O60477 761 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 PIGNO95427 931 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 TIMP2P16035 220 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 EIF2S3P41091 472 aaKnown RBP14.89□□□□□ -0.03
CBX3-203ENST00000409747 PRKCIP41743 596 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 RPIAP49247 311 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 BLKP51451 505 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 EIF2B5Q13144 721 aaKnown RBP14.89□□□□□ -0.03
CBX3-203ENST00000409747 CYTH1Q15438 398 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 KLHL40Q2TBA0 621 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 CDCP2Q5VXM1 449 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 RFX8Q6ZV50 586 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 PHACTR4Q8IZ21 702 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 TP53I13Q8NBR0 393 aaPredicted RBP14.89□□□□□ -0.03
CBX3-203ENST00000409747 MAPK15Q8TD08 544 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 SUV39H2Q9H5I1 410 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 HAUS4Q9H6D7 363 aa14.89□□□□□ -0.03
CBX3-203ENST00000409747 AIPL1Q9NZN9 384 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms