RNA–Protein interactions for RNA: ENST00000409601.1

MTHFD2-202, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 5 BASIC

Gene MTHFD2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-202ENST00000409601 SIRPB2Q5JXA9 342 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 C9orf64Q5T6V5 341 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 MICALCLQ6ZW33 695 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 ZSWIM9Q86XI8 627 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 CHPFQ8IZ52 775 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 STK40Q8N2I9 435 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 TRIB3Q96RU7 358 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 SAYSD1Q9NPB0 183 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 SORCS3Q9UPU3 1222 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 STON1Q9Y6Q2 735 aa12.52□□□□□ -0.41
MTHFD2-202ENST00000409601 CXorf51AA0A1B0GTR3 108 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 LOC285095A0A1B0GVY8 99 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CCDC78A2IDD5 438 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 GSRP00390 522 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 EPHX1P07099 455 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ATXN1LP0C7T5 689 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 MGAT1P26572 445 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 SLC8A1P32418 973 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 TNFRSF4P43489 277 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 SEMG2Q02383 582 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CDK18Q07002 472 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.411e-7■□□□□ 9
MTHFD2-202ENST00000409601 MLF2Q15773 248 aaPredicted RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 HNRNPA1L2Q32P51 320 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 LRRC8BQ6P9F7 803 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 UCMAQ8WVF2 138 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 TDRD1Q9BXT4 1180 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CASS4Q9NQ75 786 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 VPS45Q9NRW7 570 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 MTRF1LQ9UGC7 380 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 SARDHQ9UL12 918 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 STARD13Q9Y3M8 1113 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 PCDHB9Q9Y5E1 797 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ADAM23O75077 832 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 LEFTY1O75610 366 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 POP4O95707 220 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 UGT2B4P06133 528 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 MAGEA3P43357 314 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 RECQLP46063 649 aaPredicted RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CSNK1DP48730 415 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ARL4CP56559 192 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 AP1S1P61966 158 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CDK16Q00536 496 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 BRD3Q15059 726 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 KIAA1211LQ6NV74 962 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 METTL3Q86U44 580 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 EIF1ADQ8N9N8 165 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 LPCAT1Q8NF37 534 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 ANKRD7Q92527 254 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 IFT43Q96FT9 208 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 FAM129BQ96TA1 746 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 TXLNGYQ9BZA5 131 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 SEMA4AQ9H3S1 761 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 SYBUQ9NX95 663 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 WASF2Q9Y6W5 498 aa12.51□□□□□ -0.41
MTHFD2-202ENST00000409601 CCDC151A5D8V7 595 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 ERI2A8K979 691 aaKnown RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 PLK4O00444 970 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 RNF40O75150 1001 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 KLF8O95600 359 aaPredicted RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 GLULP15104 373 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 CTPS1P17812 591 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 MCM3P25205 808 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 ELK3P41970 407 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 BCL2L1Q07817 233 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 CCINQ13939 588 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 CES3Q6UWW8 571 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 Q6ZS52 159 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 TMC3Q7Z5M5 1100 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 SUGP1Q8IWZ8 645 aaKnown RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 SIX5Q8N196 739 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 UHMK1Q8TAS1 419 aaKnown RBP12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 SIGLEC10Q96LC7 697 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 HEPHQ9BQS7 1158 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 FOXQ1Q9C009 403 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 PRSS16Q9NQE7 514 aa12.5□□□□□ -0.41
MTHFD2-202ENST00000409601 ARHGEF3Q9NR81 526 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms