RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ATXN7L2Q5T6C5 722 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 NCEH1Q6PIU2 408 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 KCNMB4Q86W47 210 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 C4orf33Q8N1A6 199 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ST13P5Q8NFI4 369 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ATP2A3Q93084 1043 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 TREX1Q9NSU2 369 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 C20orf96Q9NUD7 363 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 DUS2Q9NX74 493 aaKnown RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 PSD3Q9NYI0 1048 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ZFATQ9P243 1243 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 PSAT1Q9Y617 370 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 EPOP01588 193 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 F7P08709 466 aaPredicted RBP14.19□□□□□ -0.14
GPNMB-203ENST00000409458 PABPC1P11940 636 aaKnown RBP14.19□□□□□ -0.14
GPNMB-203ENST00000409458 CES1P23141 567 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 FCARP24071 287 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 STK19P49842 368 aaPredicted RBP14.19□□□□□ -0.14
GPNMB-203ENST00000409458 TRAF2Q12933 501 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 DHCR24Q15392 516 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 EML3Q32P44 896 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 ESRP1Q6NXG1 681 aaKnown RBP14.19□□□□□ -0.14
GPNMB-203ENST00000409458 PACS1Q6VY07 963 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 MICALCLQ6ZW33 695 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 SMARCD2Q92925 531 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 SERAC1Q96JX3 654 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 TM6SF2Q9BZW4 377 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 KCNK9Q9NPC2 374 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 SENP1Q9P0U3 644 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 CHKBQ9Y259 395 aa14.19□□□□□ -0.14
GPNMB-203ENST00000409458 HEATR9A2RTY3 570 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 HMX2A2RU54 273 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 TRIM49D1C9J1S8 452 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 GOLGA8TH3BQL2 631 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 TRIM24O15164 1050 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 SPAG7O75391 227 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 NDST3O95803 873 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 KRT4P19013 534 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 ARNTP27540 789 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 NSUN2Q08J23 767 aaKnown RBP eCLIP14.18□□□□□ -0.14
GPNMB-203ENST00000409458 MPP2Q14168 576 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 HSP90AA5PQ58FG0 334 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 TEDDM1Q5T9Z0 273 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 KIAA1958Q8N8K9 716 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 NAT16Q8N8M0 369 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 BPIFB1Q8TDL5 484 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 RPL10LQ96L21 214 aaKnown RBP14.18□□□□□ -0.14
GPNMB-203ENST00000409458 SMC6Q96SB8 1091 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 AGAP2Q99490 1192 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 KLF6Q99612 283 aaPredicted RBP14.18□□□□□ -0.14
GPNMB-203ENST00000409458 ZNF576Q9H609 170 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 IARS2Q9NSE4 1012 aaKnown RBP14.18□□□□□ -0.14
GPNMB-203ENST00000409458 GDE1Q9NZC3 331 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 PCDHGC4Q9Y5F7 938 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 RAI2Q9Y5P3 530 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 BPTFQ12830 3046 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 MYO9BQ13459 2157 aa14.18□□□□□ -0.14
GPNMB-203ENST00000409458 HEPACAM2A8MVW5 462 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ZNF821O75541 412 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 PRLP01236 227 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 PDHA1P08559 390 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SNRPAP09012 282 aaKnown RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ADH5P11766 374 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SRCP12931 536 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ARSAP15289 507 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ARCN1P48444 511 aaKnown RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SERPINB9P50453 376 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 CNGA3Q16281 694 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 TSTD2Q5T7W7 516 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ARMC3Q5W041 872 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 PDPK2PQ6A1A2 396 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 SRLQ86TD4 932 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ANKRD42Q8N9B4 389 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 LPCAT1Q8NF37 534 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 OR6K2Q8NGY2 324 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 MGARPQ8TDB4 240 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 BLOC1S5Q8TDH9 187 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ATXN2LQ8WWM7 1075 aaKnown RBP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ZFYVE19Q96K21 471 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 TNKS2Q9H2K2 1166 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 PRO3102Q9H379 93 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 CLEC1BQ9P126 229 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 DENND4AQ7Z401 1863 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 MROH6A6NGR9 719 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 GOLGA8RI6L899 631 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 PRPF4O43172 522 aaKnown RBP eCLIP14.17□□□□□ -0.14
GPNMB-203ENST00000409458 TBX10O75333 385 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 KRT37O76014 449 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 MT-ND3P03897 115 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 PIRTP0C851 137 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 GP5P40197 560 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 ADAM15Q13444 863 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 RALGPS1Q5JS13 557 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 MROH9Q5TGP6 573 aa14.17□□□□□ -0.14
GPNMB-203ENST00000409458 KIAA0930Q6ICG6 404 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms