RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 HDAC7Q8WUI4 952 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 DLGAP2Q9P1A6 1054 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 C3P01024 1663 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 LDLRP01130 860 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 HSMCR30P0CW71 290 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 XKR6Q5GH73 641 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 INTS11Q5TA45 600 aaKnown RBP25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 TIFAQ96CG3 184 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 EXO5Q9H790 373 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 FANCEQ9HB96 536 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 SLC24A3Q9HC58 644 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 CA12O43570 354 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 FAM20BO75063 409 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 TFEBP19484 476 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 SERPINB3P29508 390 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 CRATP43155 626 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 ZNF280AP59817 542 aaPredicted RBP25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 RAB10P61026 200 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 LCLAT1Q6UWP7 414 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 PGM2Q96G03 612 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 MAFBQ9Y5Q3 323 aaPredicted RBP25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 MC4RP32245 332 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 BIKQ13323 160 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 SAMD4BQ5PRF9 694 aaKnown RBP25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 FUT10Q6P4F1 479 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 KIAA2013Q8IYS2 634 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 ABCG4Q9H172 646 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 RABGEF1Q9UJ41 708 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 PARP15Q460N3 678 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 MACC1Q6ZN28 852 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 EPHX4Q8IUS5 362 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 CLIP3Q96DZ5 547 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 RNF145Q96MT1 663 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 ASF1AQ9Y294 204 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 MSI1O43347 362 aaKnown RBP25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 BHLHB9Q6PI77 547 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 OR10G6Q8NH81 332 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 PAPOLBQ9NRJ5 636 aaKnown RBP25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 ADAM30Q9UKF2 790 aa25.24■■□□□ 1.63
SPIRE1-202ENST00000409402 FAM151BQ6UXP7 276 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 BEND7Q8N7W2 519 aaPredicted RBP25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 ITFG1Q8TB96 612 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 UPF1Q92900 1129 aaKnown RBP eCLIP25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 TXNDC11Q6PKC3 985 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 SLC28A1O00337 649 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 ULK1O75385 1050 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 PRKCZQ05513 592 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 C12orf50Q8NA57 414 aaPredicted RBP25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 LRRC19Q9H756 370 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 ZNF711Q9Y462 761 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 CD3EAPO15446 510 aaKnown RBP25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 IRGQQ8WZA9 623 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 PPP3R2Q96LZ3 170 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 IL1RAPL1Q9NZN1 696 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 OR10H1Q9Y4A9 318 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 DCXO43602 365 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 SMNDC1O75940 238 aaKnown RBP eCLIP25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 ARL2P36404 184 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 ATP6V0D1P61421 351 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 ALG11Q2TAA5 492 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 CRTC3Q6UUV7 619 aa25.23■■□□□ 1.63
SPIRE1-202ENST00000409402 LRRC14BA6NHZ5 514 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 CCNDBP1O95273 360 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 MTERF3Q96E29 417 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 APOL4Q9BPW4 351 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 TBC1D30Q9Y2I9 924 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 SLC5A3P53794 718 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 POTEHQ6S545 545 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 BTBD10Q9BSF8 475 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 RPRD1BQ9NQG5 326 aaKnown RBP25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 PHPT1Q9NRX4 125 aaPredicted RBP25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 MED1Q15648 1581 aaPredicted RBP25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 CHURC1-FNTBB4DL54 471 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 CILPO75339 1184 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 WNT3AP56704 352 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 MRPL57Q9BQC6 102 aaKnown RBP25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 GPN3Q9UHW5 284 aaPredicted RBP25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 ME2P23368 584 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 TERB1Q8NA31 727 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 KLHL5Q96PQ7 755 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 TBCDQ9BTW9 1192 aa25.22■■□□□ 1.63
SPIRE1-202ENST00000409402 HIST1H2ABP04908 130 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 SERPINB1P30740 379 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 CHST9Q7L1S5 443 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 HIST3H2AQ7L7L0 130 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 FAM20CQ8IXL6 584 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 HIST1H2ACQ93077 130 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 PLK2Q9NYY3 685 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 TCHHL1Q5QJ38 904 aaPredicted RBP25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 OTUD3Q5T2D3 398 aaPredicted RBP25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 PSRC1Q6PGN9 363 aaPredicted RBP25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 OR6K2Q8NGY2 324 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 AENQ8WTP8 325 aaKnown RBP25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 BAP1Q92560 729 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 RIPOR3Q96MK2 946 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 EBNA1BP2Q99848 306 aaKnown RBP25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 KCNE2Q9Y6J6 123 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 OTCP00480 354 aa25.21■■□□□ 1.63
SPIRE1-202ENST00000409402 CLCNKBP51801 687 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms