RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 ZC3H18Q86VM9 953 aaKnown RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 CAMK1DQ8IU85 385 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 ACTL9Q8TC94 416 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 RUBCNQ92622 972 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 RAB7BQ96AH8 199 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 NSMCE3Q96MG7 304 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 QKIQ96PU8 341 aaKnown RBP eCLIP20.52■□□□□ 0.881e-11■■■■■ 28.1
PTCD3-202ENST00000409326 TLR10Q9BXR5 811 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 PREBQ9HCU5 417 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-202ENST00000409326 LRRK1Q38SD2 2015 aa20.52■□□□□ 0.88
PTCD3-202ENST00000409326 WDR87Q6ZQQ6 2873 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 TTC24A2A3L6 582 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-202ENST00000409326 GOLGA6L9A6NEM1 432 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 JCHAINP01591 159 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 ITPKAP23677 461 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 DPP6P42658 865 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 WDR45BQ5MNZ6 344 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 SYCP2LQ5T4T6 812 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 B4GALNT4Q76KP1 1039 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 BIRC7Q96CA5 298 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 ECHDC3Q96DC8 303 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 SEMA3CQ99985 751 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 ARRDC1-AS1Q9H2J1 176 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 NOD2Q9HC29 1040 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 ATP8A1Q9Y2Q0 1164 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 TTLL3Q9Y4R7 772 aa20.51■□□□□ 0.87
PTCD3-202ENST00000409326 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3DA0A087WVF3 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3IA0A087WXS9 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3EA0A087X179 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3KA0A087X1G2 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3FA6NER0 549 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-202ENST00000409326 USP27XA6NNY8 438 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3LB9A6J9 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TRAFD1O14545 582 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-202ENST00000409326 KCNK3O14649 394 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 MTSS1O43312 755 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 AP1G1O43747 822 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 SOCS5O75159 536 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 IGHV4-34P06331 123 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3HP0C7X1 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 CES1P23141 567 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 MPLP40238 635 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 ABL2P42684 1182 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 CCR5P51681 352 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 ITKQ08881 620 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 SLC45A4Q5BKX6 768 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 PEAR1Q5VY43 1037 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3GQ6DHY5 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3CQ6IPX1 549 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 BRAT1Q6PJG6 821 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 SYT12Q8IV01 421 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TBC1D3Q8IZP1 549 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-202ENST00000409326 CNTD1Q8N815 330 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TTC13Q8NBP0 860 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 DNASE2BQ8WZ79 361 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 HINFPQ9BQA5 517 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 SEPT10Q9P0V9 454 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 PILRBQ9UKJ0 227 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TPX2Q9ULW0 747 aaKnown RBP20.5■□□□□ 0.87
PTCD3-202ENST00000409326 JRKLQ9Y4A0 524 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 FADS3Q9Y5Q0 445 aa20.5■□□□□ 0.87
PTCD3-202ENST00000409326 TP53BP1Q12888 1972 aaPredicted RBP20.5■□□□□ 0.87
PTCD3-202ENST00000409326 CACNA1EQ15878 2313 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 H7C0C1 242 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 HTRA2O43464 458 aaPredicted RBP20.49■□□□□ 0.87
PTCD3-202ENST00000409326 KIF5CO60282 957 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 LRP3O75074 770 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 FSBPO95073 299 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 PTPN3P26045 913 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 HOXD12P35452 270 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 ATP5OP48047 213 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 SUOXP51687 545 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 PPP2CBP62714 309 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 PPP2CAP67775 309 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 DSC2Q02487 901 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 TEX44Q53QW1 395 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 ZNF569Q5MCW4 686 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 PLA2G2CQ5R387 149 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 NEK5Q6P3R8 708 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 TRIM69Q86WT6 500 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 RGL4Q8IZJ4 473 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 SPOCK2Q92563 424 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 PIGKQ92643 395 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 CEP41Q9BYV8 373 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 ATXN2Q99700 1313 aaKnown RBP20.49■□□□□ 0.87
PTCD3-202ENST00000409326 PIEZO1Q92508 2521 aa20.49■□□□□ 0.87
PTCD3-202ENST00000409326 A0A1W2PQ67 120 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 SPINT1O43278 529 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 LATO43561 262 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 RBP3P10745 1247 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 TIMP2P16035 220 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 MSNP26038 577 aaKnown RBP20.48■□□□□ 0.87
PTCD3-202ENST00000409326 EIF3EP60228 445 aaKnown RBP20.48■□□□□ 0.87
PTCD3-202ENST00000409326 WASHC5Q12768 1159 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 TRAF2Q12933 501 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 UGP2Q16851 508 aa20.48■□□□□ 0.87
PTCD3-202ENST00000409326 TTC7BQ86TV6 843 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms