RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF641Q96N77 438 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-206ENST00000409141 ATP13A3Q9H7F0 1226 aa18.14■□□□□ 0.5
PDLIM2-206ENST00000409141 CACNA1AO00555 2505 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 RCCD1A6NED2 376 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 KCNK3O14649 394 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 MUSKO15146 869 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 GJB3O75712 270 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 MAP3K6O95382 1288 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 SERPINA4P29622 427 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 HSPA9P38646 679 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 GARSP41250 739 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 CTSKP43235 329 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 GALNT2Q10471 571 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 SLC14A1Q13336 389 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 TMEM259Q4ZIN3 620 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 LRRC73Q5JTD7 316 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 MARC1Q5VT66 337 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 MFSD2AQ8NA29 543 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 ACRBPQ8NEB7 543 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 SLC17A9Q9BYT1 436 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 GGT7Q9UJ14 662 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 ITM2BQ9Y287 266 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 REXO2Q9Y3B8 237 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 SPTBN2O15020 2390 aa18.14■□□□□ 0.49
PDLIM2-206ENST00000409141 ASCC3Q8N3C0 2202 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 C3orf70A6NLC5 250 aaPredicted RBP18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 ZNF487B1APH4 448 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 TLR4O00206 839 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 AKT2P31751 481 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 NAP1L1P55209 391 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 GBE1Q04446 702 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 BCL2L1Q07817 233 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 SGCGQ13326 291 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 IFI16Q16666 785 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 DAAM2Q86T65 1068 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 VSIG1Q86XK7 387 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 TMEM139Q8IV31 216 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 PAF1Q8N7H5 531 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 MYOCQ99972 504 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 CA5BQ9Y2D0 317 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 DUSP10Q9Y6W6 482 aa18.13■□□□□ 0.49
PDLIM2-206ENST00000409141 PLXNA2O75051 1894 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 TTC24A2A3L6 582 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 IGLON5A6NGN9 336 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 AREL1O15033 823 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 SPINT1O43278 529 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 PSTPIP1O43586 416 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 KCNK5O95279 499 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 PAK4O96013 591 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 CD59P13987 128 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 ITIH2P19823 946 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 MX2P20592 715 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 CSRP1P21291 193 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 HNRNPA2B1P22626 353 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 CCNCP24863 283 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 MMP13P45452 471 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 SUOXP51687 545 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 AP1S1P61966 158 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 SLC10A2Q12908 348 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 UGP2Q16851 508 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 TIGD7Q6NT04 549 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 C11orf63Q6NUN7 778 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 BRAT1Q6PJG6 821 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 KIAA1328Q86T90 577 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 IQCHQ86VS3 1027 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 RFX6Q8HWS3 928 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 PGBD5Q8N414 524 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 CCNYQ8ND76 341 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 TPCN2Q8NHX9 752 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 SLC32A1Q9H598 525 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 FZD3Q9NPG1 666 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 SCUBE2Q9NQ36 999 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 TM7SF3Q9NS93 570 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 SALL4Q9UJQ4 1053 aa18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 FNDC3AQ9Y2H6 1198 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-206ENST00000409141 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 TSPAN11A1L157 253 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 UPK3BL1B0FP48 263 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 UPK3BL2E5RIL1 263 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 H0Y8X5 98 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 APOL1O14791 398 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 MATN3O15232 486 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 MAGEC1O60732 1142 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 ZNF883P0CG24 379 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 NOVA1P51513 510 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 VAV2P52735 878 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 ELP6Q0PNE2 266 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 OVGP1Q12889 678 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 HNRNPDQ14103 355 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 PRAMEF14Q5SWL7 426 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 SLC9A4Q6AI14 798 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 PSAPL1Q6NUJ1 521 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 MFSD7Q6UXD7 560 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 PLD5Q8N7P1 536 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 DEFB124Q8NES8 71 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 CXorf40AQ8TE69 158 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 KLHDC7BQ96G42 594 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms