RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 AREL1O15033 823 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 LRCH4O75427 683 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 PALMO75781 387 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 PAK4O96013 591 aaPredicted RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 SKILP12757 684 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 HTR1BP28222 390 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 ABL2P42684 1182 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 ACADVLP49748 655 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 BLKP51451 505 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 AP1S1P61966 158 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 POLR2LP62875 67 aaKnown RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 IL10RBQ08334 325 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 SHBQ15464 509 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 DPYSL2Q16555 572 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 HADHQ16836 314 aaKnown RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 PRAMEF14Q5SWL7 426 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 ATXN7L2Q5T6C5 722 aaPredicted RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 TMCO3Q6UWJ1 677 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 Q6ZSR6 202 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 LRRC49Q8IUZ0 686 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 PDCD7Q8N8D1 485 aaKnown RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 NIPA2Q8N8Q9 360 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 OR4C6Q8NH72 309 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 KLK6Q92876 244 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 GLMNQ92990 594 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 NXPE2Q96DL1 559 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 TBATAQ96M53 351 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 NOL6Q9H6R4 1146 aaKnown RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 PDFQ9HBH1 243 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 FZD3Q9NPG1 666 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 GPR27Q9NS67 375 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 GPATCH2LQ9NWQ4 482 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 DNAJC28Q9NX36 388 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 NLGN3Q9NZ94 848 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 RCOR3Q9P2K3 495 aaPredicted RBP9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 DKK4Q9UBT3 224 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 SEPT3Q9UH03 358 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 CSNK1G3Q9Y6M4 447 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 CFAP69A5D8W1 941 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 IGLON5A6NGN9 336 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 MYO1FO00160 1098 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 DFFAO00273 331 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 PIAS2O75928 621 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 GP1BAP07359 652 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 KRT10P13645 584 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 JUPP14923 745 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 NME1P15531 152 aaKnown RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ERCC2P18074 760 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 DGKAP23743 735 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ACP1P24666 158 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 PBX1P40424 430 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 PAPOLAP51003 745 aaKnown RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 CLDN2P57739 230 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 NSUN2Q08J23 767 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 BNIP3Q12983 259 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 PDE1CQ14123 709 aaPredicted RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 KRT81Q14533 505 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNF235Q14590 738 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ZSCAN23Q3MJ62 389 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 TMEM52BQ4KMG9 183 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 RALGPS1Q5JS13 557 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 AFMIDQ63HM1 303 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 E4F1Q66K89 784 aaPredicted RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ALKBH5Q6P6C2 394 aaKnown RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 DHRS13Q6UX07 377 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 LEKR1Q6ZMV7 388 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 KANSL1Q7Z3B3 1105 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 SRLQ86TD4 932 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 PROSER1Q86XN7 944 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 CACTIN-AS1Q8N1I8 211 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ATPAF2Q8N5M1 289 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 TSC1Q92574 1164 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 CELF6Q96J87 481 aaKnown RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 KCTD15Q96SI1 283 aaPredicted RBP9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 MAGEB5Q9BZ81 275 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 DEF6Q9H4E7 631 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 SUV39H2Q9H5I1 410 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 KCTD5Q9NXV2 234 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 IFNKQ9P0W0 207 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 UVRAGQ9P2Y5 699 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 SPASTQ9UBP0 616 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ANAPC7Q9UJX3 599 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 CA5BQ9Y2D0 317 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 ACTL7AQ9Y615 435 aa9.18□□□□□ -0.94
SNORD88A-201ENST00000408314 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 TPP1O14773 563 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SCAMP1O15126 338 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 FFAR2O15552 330 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 SDC3O75056 442 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CSF2P04141 144 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 CYP1A2P05177 515 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 KELP23276 732 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 GKP32189 559 aa9.17□□□□□ -0.94
SNORD88A-201ENST00000408314 RPIAP49247 311 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms