RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ZDHHC6Q9H6R6 413 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 CACNA2D2Q9NY47 1150 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 RAI2Q9Y5P3 530 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 PIGNO95427 931 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 HNRNPLP14866 589 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHKB-201ENST00000406938 DRD1P21728 446 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 PRKCHP24723 683 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CHRNA4P43681 627 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CDK18Q07002 472 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CDH17Q12864 832 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 PDIA2Q13087 525 aaKnown RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 MLF2Q15773 248 aaPredicted RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 BBS9Q3SYG4 887 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 RANBP10Q6VN20 620 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CHST14Q8NCH0 376 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 HNRNPLLQ8WVV9 542 aaKnown RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 FAM3CQ92520 227 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 PTPRN2Q92932 1015 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CAVIN3Q969G5 261 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 VOPP1Q96AW1 172 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 TRIB3Q96RU7 358 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 ATP13A3Q9H7F0 1226 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 EDDM13A0A1B0GTR0 161 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 LOC285095A0A1B0GVY8 99 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 WASH3PC4AMC7 463 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 E7ESA3 106 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CHRM1P11229 460 aaPredicted RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 TNNT3P45378 269 aaPredicted RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 SESN2P58004 480 aaPredicted RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 BCL2L1Q07817 233 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 DHX9Q08211 1270 aaKnown RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 FASTKD3Q14CZ7 662 aaKnown RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 SLC1A5Q15758 541 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 DENND5AQ6IQ26 1287 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CAMK1DQ8IU85 385 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 AGGF1Q8N302 714 aaeCLIP20.67■□□□□ 0.9
CHKB-201ENST00000406938 SLC25A41Q8N5S1 370 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 TUBGCP5Q96RT8 1024 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 WDR83Q9BRX9 315 aaKnown RBP20.67■□□□□ 0.9
CHKB-201ENST00000406938 SAYSD1Q9NPB0 183 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 CHKBQ9Y259 395 aa20.67■□□□□ 0.9
CHKB-201ENST00000406938 DYNC1I1O14576 645 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 POP4O95707 220 aaKnown RBP20.66■□□□□ 0.9
CHKB-201ENST00000406938 ATXN1LP0C7T5 689 aaKnown RBP20.66■□□□□ 0.9
CHKB-201ENST00000406938 BMP1P13497 986 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 CA4P22748 312 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 SERPINA4P29622 427 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 TIE1P35590 1138 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 GALNT3Q14435 633 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 DNAJC21Q5F1R6 531 aaKnown RBP20.66■□□□□ 0.9
CHKB-201ENST00000406938 HP1BP3Q5SSJ5 553 aaPredicted RBP20.66■□□□□ 0.9
CHKB-201ENST00000406938 CEP128Q6ZU80 1094 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 ZBED8Q8IZ13 594 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 CHPFQ8IZ52 775 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 GRIN3AQ8TCU5 1115 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 PDCD6IPQ8WUM4 868 aaKnown RBP20.66■□□□□ 0.9
CHKB-201ENST00000406938 ANKRD7Q92527 254 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 ASB2Q96Q27 587 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 TXLNGYQ9BZA5 131 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 CA14Q9ULX7 337 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 STON1Q9Y6Q2 735 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 F5P12259 2224 aa20.66■□□□□ 0.9
CHKB-201ENST00000406938 TRAFD1O14545 582 aaPredicted RBP20.65■□□□□ 0.9
CHKB-201ENST00000406938 NPC1O15118 1278 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 EIF3HO15372 352 aaKnown RBP eCLIP20.65■□□□□ 0.9
CHKB-201ENST00000406938 SOCS5O75159 536 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 PRLP01236 227 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 EPOP01588 193 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 EPHX1P07099 455 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 PDHA1P08559 390 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 HLA-DPA1P20036 260 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 CD72P21854 359 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 MGAT1P26572 445 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 RAD51Q06609 339 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 ENPP2Q13822 863 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 SLMAPQ14BN4 828 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 E2F5Q15329 346 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 SIRPB2Q5JXA9 342 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 BEND6Q5SZJ8 279 aaPredicted RBP20.65■□□□□ 0.9
CHKB-201ENST00000406938 C9orf64Q5T6V5 341 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 HEPHQ9BQS7 1158 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 CPEB1Q9BZB8 566 aaKnown RBP20.65■□□□□ 0.9
CHKB-201ENST00000406938 ARNT2Q9HBZ2 717 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 ARHGEF3Q9NR81 526 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 ARIH1Q9Y4X5 557 aaPredicted RBP20.65■□□□□ 0.9
CHKB-201ENST00000406938 WASF2Q9Y6W5 498 aa20.65■□□□□ 0.9
CHKB-201ENST00000406938 AP3B1O00203 1094 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 HTRA2O43464 458 aaPredicted RBP20.64■□□□□ 0.9
CHKB-201ENST00000406938 SIN3BO75182 1162 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 NDST3O95803 873 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 CRADDP78560 199 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 GRM3Q14832 879 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 C2orf27AQ580R0 203 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 MPP5Q8N3R9 675 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 LPCAT1Q8NF37 534 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 ARFGAP3Q9NP61 516 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 SYBUQ9NX95 663 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 IL36AQ9UHA7 158 aa20.64■□□□□ 0.9
CHKB-201ENST00000406938 PCDHB9Q9Y5E1 797 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms