RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 KREMEN1Q96MU8 473 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 CCNB1IP1Q9NPC3 277 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 XRN1Q8IZH2 1706 aaKnown RBP13.46□□□□□ -0.26
SNED1-205ENST00000405547 CXCL11O14625 94 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 NRP2O60462 931 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 CALCAP01258 141 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 ALOX5P09917 674 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 ACSM2AQ08AH3 577 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 ACSM2BQ68CK6 577 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 CDH24Q86UP0 819 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 SYT12Q8IV01 421 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 KBTBD2Q8IY47 623 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 PWWP2AQ96N64 755 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 MTIF3Q9H2K0 278 aaKnown RBP13.46□□□□□ -0.26
SNED1-205ENST00000405547 FETUBQ9UGM5 382 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.26
SNED1-205ENST00000405547 AVILO75366 819 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 RPN2P04844 631 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 ETS2P15036 469 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 ITGA2P17301 1181 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 BDNFP23560 247 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 CD86P42081 329 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 DACT2Q5SW24 774 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 PTGR2Q8N8N7 351 aaPredicted RBP13.46□□□□□ -0.26
SNED1-205ENST00000405547 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.26
SNED1-205ENST00000405547 EHD3Q9NZN3 535 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 GNPTGQ9UJJ9 305 aa13.46□□□□□ -0.26
SNED1-205ENST00000405547 CST1P01037 141 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 FGFR1P11362 822 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ARMC12Q5T9G4 340 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CHMP1BQ7LBR1 199 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ZHX1-C8orf76Q96EF9 292 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CDH22Q9UJ99 828 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 SGTAO43765 313 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 NFICP08651 508 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 RPS6KB2Q9UBS0 482 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 G3V2T6 193 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 COL6A2P12110 1019 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 FECHP22830 423 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ABCG1P45844 678 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 BOP1Q14137 746 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 SLC1A5Q15758 541 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 NDUFA5Q16718 116 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 GCNT7Q6ZNI0 430 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 GPRIN3Q6ZVF9 776 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 BTBD9Q96Q07 612 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CCDC182A6NF36 153 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 A8MUI8 341 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 H7C0S8 307 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 DYRK3O43781 588 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 SIN3BO75182 1162 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 HPGDP15428 266 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 USP46P62068 366 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ZNF540Q8NDQ6 660 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 SMAD5Q99717 465 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 HSD3B7Q9H2F3 369 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 DPPA5A6NC42 116 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 WNT10BO00744 389 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ULK1O75385 1050 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 RPL3P39023 403 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 OLR1P78380 273 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ZC3H12AQ5D1E8 599 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 PAGE2BQ5JRK9 111 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 EIF3MQ7L2H7 374 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 ZNF438Q7Z4V0 828 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CACTIN-AS1Q8N1I8 211 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 DENND2DQ9H6A0 471 aaPredicted RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 MARCH2Q9P0N8 246 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 LYPLA2O95372 231 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 BCL2L1Q07817 233 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 CWF19L1Q69YN2 538 aaKnown RBP13.45□□□□□ -0.26
SNED1-205ENST00000405547 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 ERGIC3Q9Y282 383 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 TRAF6Q9Y4K3 522 aa13.45□□□□□ -0.26
SNED1-205ENST00000405547 RNASEH1O60930 286 aaKnown RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 MTA2O94776 668 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ANXA5P08758 320 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ZNF614Q8N883 585 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 AP3S1Q92572 193 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ADARB2Q9NS39 739 aaKnown RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 ZSCAN32Q9NX65 697 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 TYMPP19971 482 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 SLC7A2P52569 658 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 CDC42P60953 191 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 LPIN1Q14693 890 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 POC5Q8NA72 575 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ARHGEF3Q9NR81 526 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 DNAJC28Q9NX36 388 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms