RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TUBGCP3Q96CW5 907 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 RMDN1Q96DB5 314 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 IFT43Q96FT9 208 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 HBEGFQ99075 208 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 SIKE1Q9BRV8 207 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 C11orf84Q9BUA3 381 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 DRC3Q9H069 523 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 NOL11Q9H8H0 719 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 PSMD12O00232 456 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 GRID2O43424 1007 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 RPL10P27635 214 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 PFKFB4Q16877 469 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 GALNT15Q8N3T1 639 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 KCNN1Q92952 543 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 CCT7Q99832 543 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 STK39Q9UEW8 545 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 E7ENX8 843 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 J3KR12 359 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 ZNF195O14628 629 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 MRASO14807 208 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 GJB3O75712 270 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 IL1BP01584 269 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 GRIA3P42263 894 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 OR1G1P47890 313 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 LCA5Q86VQ0 697 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 CENPLQ8N0S6 344 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 CFAP52Q8N1V2 620 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 EFHBQ8N7U6 833 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 RP9Q8TA86 221 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 CASP10Q92851 521 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 RPRD1AQ96P16 312 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 LIN28AQ9H9Z2 209 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 FER1L6Q2WGJ9 1857 aa12.78□□□□□ -0.36
PPP4R1-202ENST00000400555 COL1A2P08123 1366 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 CRTAMO95727 393 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 WARSP23381 471 aaKnown RBP12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 GRK4P32298 578 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 GPR15P49685 360 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC7A2P52569 658 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 GEMP55040 296 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 CSE1LP55060 971 aaKnown RBP12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 NAB1Q13506 487 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 GALNT3Q14435 633 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 LPGAT1Q92604 370 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 TMEM79Q9BSE2 394 aa12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.36
PPP4R1-202ENST00000400555 TADA2AO75478 443 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 ITGB1P05556 798 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 APOA4P06727 396 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 UGT1A6P19224 532 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 THEM5Q8N1Q8 247 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 TBATAQ96M53 351 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 CCDC68Q9H2F9 335 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 STN1Q9H668 368 aaKnown RBP12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 BRCA2P51587 3418 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 A0A1B0GTW7 788 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 A0A1W2PQH9 124 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 ARHGEF37A1IGU5 675 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 TMEM114B3SHH9 223 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 PPP6CO00743 305 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 TNPO2O14787 897 aaKnown RBP12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 CRYBB1P53674 252 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 TMED1Q13445 227 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 PSMD5Q16401 504 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 AGAP9Q5VTM2 703 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 RAP1GAP2Q684P5 730 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 CUZD1Q86UP6 607 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 ADAM2Q99965 735 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 MID1IP1Q9NPA3 183 aa12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-202ENST00000400555 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 ODC1P11926 461 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 LRPAP1P30533 357 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 ECT2LQ008S8 904 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC10A7Q0GE19 358 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 MARC1Q5VT66 337 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 LRRTM3Q86VH5 581 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 TRPC4APQ8TEL6 797 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 CYGBQ8WWM9 190 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 GPR22Q99680 433 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 UBE2OQ9C0C9 1292 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 TIMM22Q9Y584 194 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 A0A0U1RQS6 177 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 SUPT3HO75486 399 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 PSMC3P17980 439 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 CDH15P55291 814 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms