RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TAF10Q12962 218 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 NRF1Q16656 503 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ISLR2Q6UXK2 745 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 SERPINA13PQ6UXR4 307 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 CASP12Q6UXS9 341 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 YTHDF3Q7Z739 585 aaKnown RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 RNPEPL1Q9HAU8 725 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ANAPC2Q9UJX6 822 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 BMP10O95393 424 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 PIK3R1P27986 724 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 IQCKQ8N0W5 287 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ATAD1Q8NBU5 361 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 DLG3Q92796 817 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 GLOD4Q9HC38 313 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 CLUHO75153 1309 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 ATP6AP2A0A1C7CYW4 349 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 PTGES3LE9PB15 166 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 CD3EAPO15446 510 aaKnown RBP18.31■□□□□ 0.52
COL18A1-204ENST00000400337 ATP6AP2O75787 350 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 FGF1P05230 155 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL18A1-204ENST00000400337 DNAJB14Q8TBM8 379 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 RSPH1Q8WYR4 309 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 PADI3Q9ULW8 664 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 MYRFQ9Y2G1 1151 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 HGFP14210 728 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 GPR1P46091 355 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 CREMQ03060 361 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 PMF1Q6P1K2 205 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 CNSTQ6PJW8 725 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 APOL4Q9BPW4 351 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 FKTNO75072 461 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 GRIA3P42263 894 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 THOP1P52888 689 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 TCEA2Q15560 299 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 ZNF384Q8TF68 577 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 VMP1Q96GC9 406 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 SLC12A4Q9UP95 1085 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 EFR3BQ9Y2G0 817 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 MYO5BQ9ULV0 1848 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 MFSD11O43934 449 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 ANXA6P08133 673 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 NOS3P29474 1203 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 ANGPT1Q15389 498 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 NPY5RQ15761 445 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 TEX44Q53QW1 395 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 ZNF276Q8N554 614 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 PLD5Q8N7P1 536 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 KCTD15Q96SI1 283 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-204ENST00000400337 NLNQ9BYT8 704 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 VWA7Q9Y334 891 aa18.31■□□□□ 0.52
COL18A1-204ENST00000400337 RGSL1A5PLK6 1076 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 SOWAHBA6NEL2 793 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 PSME3P61289 254 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 MBTD1Q05BQ5 628 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 OR6K2Q8NGY2 324 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 ATL1Q8WXF7 558 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 SPATA31D3P0C874 917 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 SPATA31D4Q6ZUB0 917 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 ALYREFQ86V81 257 aaKnown RBP18.3■□□□□ 0.52
COL18A1-204ENST00000400337 EFCAB3Q8N7B9 438 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 SPPL2BQ8TCT7 592 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 PROX1Q92786 737 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.3■□□□□ 0.52
COL18A1-204ENST00000400337 NDOR1Q9UHB4 597 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 TMCO1Q9UM00 188 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 CDKN2BP42772 138 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 CRATP43155 626 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 GPRIN3Q6ZVF9 776 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 DPP10Q8N608 796 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 RDH11Q8TC12 318 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 AGAP11Q8TF27 550 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 ENTPD4Q9Y227 616 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 PLIN4Q96Q06 1357 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 MDM4O15151 490 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 GABRR2P28476 465 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 MC4RP32245 332 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 GUCA1AP43080 201 aaPredicted RBP18.3■□□□□ 0.52
COL18A1-204ENST00000400337 SETD9Q8NE22 299 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 FNIP1Q8TF40 1166 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 USP7Q93009 1102 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 PCDHGC3Q9UN70 934 aa18.3■□□□□ 0.52
COL18A1-204ENST00000400337 MTF2Q9Y483 593 aaPredicted RBP18.3■□□□□ 0.52
COL18A1-204ENST00000400337 IL1BP01584 269 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 RPL38P63173 70 aaKnown RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 OTOP3Q7RTS5 596 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 ADAMTSL2Q86TH1 951 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 PCDHA2Q9Y5H9 948 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 NID2Q14112 1375 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 KPNA5O15131 536 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 MAPKAPK3Q16644 382 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 USP39Q53GS9 565 aaKnown RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 TRAF7Q6Q0C0 670 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 FAM151BQ6UXP7 276 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 LRRC57Q8N9N7 239 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 SLC4A11Q8NBS3 891 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms