RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 FCRL3Q96P31 734 aaPredicted RBP13.62□□□□□ -0.23
SIRPA-203ENST00000400068 NDEL1Q9GZM8 345 aa13.62□□□□□ -0.23
SIRPA-203ENST00000400068 POLR1EQ9GZS1 481 aaKnown RBP13.62□□□□□ -0.23
SIRPA-203ENST00000400068 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
SIRPA-203ENST00000400068 SSC5DA1L4H1 1573 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 IRAK2O43187 625 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 RFPL1O75677 317 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 CNTN5O94779 1100 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 MYL4P12829 197 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 HMOX2P30519 316 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 MED21Q13503 144 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 CNSTQ6PJW8 725 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 BNC2Q6ZN30 1099 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 HS6ST3Q8IZP7 471 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 ESAMQ96AP7 390 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 GKN1Q9NS71 199 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 UBA2Q9UBT2 640 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 NKX1-2Q9UD57 310 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 BTRCQ9Y297 605 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 UBDO15205 165 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 E2F6O75461 281 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 HLA-DQB2P05538 268 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 LIMK2P53671 638 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 POU4F1Q01851 419 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 SLC34A1Q06495 639 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 BTG3Q14201 252 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 PRKD1Q15139 912 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 WASHC2DQ5SRD0 308 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 CRLS1Q9UJA2 301 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 ZNF180Q9UJW8 692 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 PCDHGC4Q9Y5F7 938 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 ATXN2Q99700 1313 aaKnown RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 CA12O43570 354 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 PTK2BQ14289 1009 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 LPIN1Q14693 890 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 DEFB115Q30KQ5 88 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 POM121L1PQ3SYA9 428 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 C16orf89Q6UX73 402 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 HPS6Q86YV9 775 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 TTC9BQ8N6N2 239 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 KYQ8NBH2 561 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 DENND1AQ8TEH3 1009 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 YME1L1Q96TA2 773 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 MRPL46Q9H2W6 279 aaKnown RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
SIRPA-203ENST00000400068 LSM7Q9UK45 103 aaKnown RBP13.61□□□□□ -0.23
SIRPA-203ENST00000400068 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 H7C4K7 107 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 BTN3A1O00481 513 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ALDH1A1P00352 501 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 CGB2Q6NT52 195 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ARCQ7LC44 396 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ACMSDQ8TDX5 336 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 RCN3Q96D15 328 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 KCTD3Q9Y597 815 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 WASF2Q9Y6W5 498 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 LRRC37AA6NMS7 1700 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ZNF831Q5JPB2 1677 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 E7ESA3 106 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 TP73O15350 636 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 SIN3BO75182 1162 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 RAG1P15918 1043 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 EEF1B2P24534 225 aaKnown RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 KCNQ1P51787 676 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 PLEKHG4Q58EX7 1191 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 GPR158Q5T848 1215 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 RELL1Q8IUW5 271 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 TRPC4APQ8TEL6 797 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 APBB2Q92870 758 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 PPP1R10Q96QC0 940 aaKnown RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 PRKAG2Q9UGJ0 569 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 TRPC5OSA6NMA1 111 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 KCNU1A8MYU2 1149 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 F8W8V4 182 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 GLUD2P49448 558 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 TRMT5Q32P41 509 aaKnown RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 CST9Q5W186 159 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 ST13P4Q8IZP2 240 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 FSTL5Q8N475 847 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 PTGR2Q8N8N7 351 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-203ENST00000400068 CNBD2Q96M20 576 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 HBEGFQ99075 208 aa13.6□□□□□ -0.23
SIRPA-203ENST00000400068 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms