RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ST3GAL2Q16842 350 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 SMTNL2Q2TAL5 461 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 POLNQ7Z5Q5 900 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 TTC7BQ86TV6 843 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 PNPLA1Q8N8W4 532 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 OR13H1Q8NG92 308 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 OR8K1Q8NGG5 319 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 EXOC2Q96KP1 924 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 TUBGCP5Q96RT8 1024 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 KLF6Q99612 283 aaPredicted RBP15.05■□□□□ -0
SMIM11A-203ENST00000399299 SP110Q9HB58 689 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.05■□□□□ -0
SMIM11A-203ENST00000399299 KLHL11Q9NVR0 708 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 RCOR3Q9P2K3 495 aaPredicted RBP15.05■□□□□ -0
SMIM11A-203ENST00000399299 GGT7Q9UJ14 662 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 ITM2BQ9Y287 266 aa15.05■□□□□ -0
SMIM11A-203ENST00000399299 ANKRD11Q6UB99 2663 aaPredicted RBP15.04■□□□□ -0
SMIM11A-203ENST00000399299 SSU72P8A0A1W2PR75 194 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 IGLON5A6NGN9 336 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 C1QTNF9BB2RNN3 333 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 DFFAO00273 331 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 INSIG1O15503 277 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 PALMO75781 387 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 C1QTNF9P0C862 333 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 TIMP2P16035 220 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 RABIFP47224 123 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 CLDN2P57739 230 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 SGCGQ13326 291 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 ASTE1Q2TB18 679 aaPredicted RBP15.04■□□□□ -0
SMIM11A-203ENST00000399299 VSTM4Q8IW00 320 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 SLC22A18ASQ8N1D0 253 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 KDF1Q8NAX2 398 aaPredicted RBP15.04■□□□□ -0
SMIM11A-203ENST00000399299 NETO2Q8NC67 525 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 ZNF564Q8TBZ8 553 aaPredicted RBP15.04■□□□□ -0
SMIM11A-203ENST00000399299 FAM71BQ8TC56 605 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 HSPH1Q92598 858 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 BTBD6Q96KE9 485 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 BMFQ96LC9 184 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 ZNF641Q96N77 438 aaPredicted RBP15.04■□□□□ -0
SMIM11A-203ENST00000399299 ZNF599Q96NL3 588 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 CSPG4P5Q96PW8 444 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 CALN1Q9BXU9 219 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 SUV39H2Q9H5I1 410 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 PCDH18Q9HCL0 1135 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 UVRAGQ9P2Y5 699 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 IPO11Q9UI26 975 aaKnown RBP15.04■□□□□ -0
SMIM11A-203ENST00000399299 LCMT1Q9UIC8 334 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 PCDHGA1Q9Y5H4 931 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 LRRK1Q38SD2 2015 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 PLXNB3Q9ULL4 1909 aa15.04■□□□□ -0
SMIM11A-203ENST00000399299 POM121BA6NF01 834 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 ENC1O14682 589 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 FPGTO14772 594 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 RAD51BO15315 384 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 PIGNO95427 931 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 LDOC1O95751 146 aaPredicted RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 TPM1P09493 284 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 CDK4P11802 303 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 NSUN2Q08J23 767 aaKnown RBP eCLIP15.03■□□□□ -0
SMIM11A-203ENST00000399299 ELP6Q0PNE2 266 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 HADHQ16836 314 aaKnown RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 TMCO4Q5TGY1 634 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 TXNRD3NBQ6F5E7 133 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 BRAT1Q6PJG6 821 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 TMCO3Q6UWJ1 677 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 Q6ZSR6 202 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 TMPRSS7Q7RTY8 843 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 PTAR1Q7Z6K3 402 aaPredicted RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 SRLQ86TD4 932 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 EID2Q8N6I1 236 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 TSEN2Q8NCE0 465 aaKnown RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 CTNNBL1Q8WYA6 563 aaPredicted RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 TSC1Q92574 1164 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 CNDP2Q96KP4 475 aaKnown RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 PSKH2Q96QS6 385 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 CINPQ9BW66 212 aaPredicted RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 ATP13A3Q9H7F0 1226 aa15.03■□□□□ -0
SMIM11A-203ENST00000399299 ZNHIT6Q9NWK9 470 aaKnown RBP15.03■□□□□ -0
SMIM11A-203ENST00000399299 TDRD6O60522 2096 aaKnown RBP15.02■□□□□ -0
SMIM11A-203ENST00000399299 SPTY2D1-AS1A0A0U1RR47 76 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 TM7SF2O76062 418 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 C1SP09871 688 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 H2AFZP0C0S5 128 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 XPAP23025 273 aaPredicted RBP15.02■□□□□ -0
SMIM11A-203ENST00000399299 AMPD1P23109 780 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 SERPINA4P29622 427 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 SERPINB6P35237 376 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 RGRP47804 291 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 RENBPP51606 427 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 PFN3P60673 137 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 UGP2Q16851 508 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 TSR1Q2NL82 804 aaKnown RBP15.02■□□□□ -0
SMIM11A-203ENST00000399299 TMEM52BQ4KMG9 183 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 ARHGAP36Q6ZRI8 547 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 H2AFVQ71UI9 128 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 GALNT15Q8N3T1 639 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 CXorf40AQ8TE69 158 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 CENPTQ96BT3 561 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 C1QTNF7Q9BXJ2 289 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 ABHD10Q9NUJ1 306 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms