RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ZNF177Q13360 481 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 MPP3Q13368 585 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SEPT6Q14141 434 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ZNF235Q14590 738 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PABPC1LQ4VXU2 614 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CCDC92Q53HC0 331 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 RNF219Q5W0B1 726 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 Q6ZNB5 142 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CARNMT1Q8N4J0 409 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PNPLA1Q8N8W4 532 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CDKL2Q92772 493 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 APOPT1Q96IL0 206 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 FAM111AQ96PZ2 611 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 KIFC1Q9BW19 673 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 MAGEH1Q9H213 219 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CFAP97Q9P2B7 532 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CCL26Q9Y258 94 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 IRAK3Q9Y616 596 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ANKRD36A6QL64 1941 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PSMD3O43242 534 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 EPCAMP16422 314 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 NEK3P51956 506 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PGGT1BP53609 377 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 LAMB3Q13751 1172 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 FAM47EQ6ZV65 393 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 KCNMB4Q86W47 210 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 BBS7Q8IWZ6 715 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 RIN3Q8TB24 985 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 RSRC1Q96IZ7 334 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 EMILIN2Q9BXX0 1053 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SLC46A2Q9BY10 475 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SSU72Q9NP77 194 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 IARS2Q9NSE4 1012 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 STOML2Q9UJZ1 356 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 MAFFQ9ULX9 164 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ASB3Q9Y575 518 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PER2O15055 1255 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ITGA2BP08514 1039 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ARNTP27540 789 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 OXCT1P55809 520 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ACTN3Q08043 901 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 DNAJC3Q13217 504 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 TEDDM1Q5T9Z0 273 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ZNF697Q5TEC3 545 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PKN3Q6P5Z2 889 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CCDC149Q6ZUS6 474 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ACVR1CQ8NER5 493 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 MAGEB18Q96M61 343 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SRPK1Q96SB4 655 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SLCO1B3Q9NPD5 702 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 MAN1C1Q9NR34 630 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CLEC4EQ9ULY5 219 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 TBC1D30Q9Y2I9 924 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 TPP1O14773 563 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 SLC18A1P54219 525 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 IL9RQ01113 521 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 STRA8Q7Z7C7 330 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 ELAC2Q9BQ52 826 aaKnown RBP15.29■□□□□ 0.04
COL25A1-201ENST00000399126 POLR1EQ9GZS1 481 aaKnown RBP15.29■□□□□ 0.04
COL25A1-201ENST00000399126 ASAH2Q9NR71 780 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 TCAF1Q9Y4C2 921 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 ILVBLA1L0T0 632 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 CCL22O00626 93 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 KDELR3O43731 214 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 AHCYL1O43865 530 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 ZWINTO95229 277 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 CD160O95971 181 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 ETV4P43268 484 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 NTHL1P78549 312 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 ARF5P84085 180 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 MSLNQ13421 630 aaPredicted RBP15.29■□□□□ 0.04
COL25A1-201ENST00000399126 SNCBQ16143 134 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 CNGA3Q16281 694 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 SIRPB2Q5JXA9 342 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 PPM1LQ5SGD2 360 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 CGB2Q6NT52 195 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 CHST9Q7L1S5 443 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 CMC1Q7Z7K0 106 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 STK39Q9UEW8 545 aa15.29■□□□□ 0.04
COL25A1-201ENST00000399126 H0Y626 953 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 BOLA2-SMG1P6H3BVE0 249 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 GFRA2O00451 464 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 COPEO14579 308 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 VAPBO95292 243 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 CA3P07451 260 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 ATXN1LP0C7T5 689 aaKnown RBP15.28■□□□□ 0.04
COL25A1-201ENST00000399126 PIRTP0C851 137 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 TNK2Q07912 1038 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 GALNT3Q14435 633 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 PPM1JQ5JR12 505 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 LGSNQ5TDP6 509 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 TPGS1Q6ZTW0 290 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 MFN1Q8IWA4 741 aa15.28■□□□□ 0.04
COL25A1-201ENST00000399126 NDUFAF2Q8N183 169 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms