RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CD101Q93033 1021 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 PEBP4Q96S96 227 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 HCSTQ9UBK5 93 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 GNPTGQ9UJJ9 305 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 GGA2Q9UJY4 613 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 STK38LQ9Y2H1 464 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CRYL1Q9Y2S2 319 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 FAM95CA0A1B0GW59 222 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 RPN2P04844 631 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TYRP14679 529 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CPA3P15088 417 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CYP2A7P20853 494 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 FMO4P31512 558 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 GALNT2Q10471 571 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CNGA3Q16281 694 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CCDC153Q494R4 210 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 LY6G5CQ5SRR4 150 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CERCAMQ5T4B2 595 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 DCAF12L1Q5VU92 463 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 ZNF572Q7Z3I7 529 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TRAPPC5Q8IUR0 188 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TTC9BQ8N6N2 239 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 DCAF4L2Q8NA75 395 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 GDPD5Q8WTR4 605 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SMARCD2Q92925 531 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SLCO2A1Q92959 643 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 HDAC10Q969S8 669 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 NCKIPSDQ9NZQ3 722 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 FBXO5Q9UKT4 447 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 AVILO75366 819 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 GRK2P25098 689 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 AAK1Q2M2I8 961 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 RASIP1Q5U651 963 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 ZNF783Q6ZMS7 281 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 KDM7AQ6ZMT4 941 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 SPATA21Q7Z572 469 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 SPATA22Q8NHS9 363 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 PGAP3Q96FM1 320 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 COPS8Q99627 209 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 BPIFA1Q9NP55 256 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 MARCH5Q9NX47 278 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 PCDHGC4Q9Y5F7 938 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 FOCADQ5VW36 1801 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 C2orf78A6NCI8 922 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 HAUS5O94927 633 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 NUDT17P0C025 328 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 DGKAP23743 735 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 HTR1BP28222 390 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 WASP42768 502 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 USP46P62068 366 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 CRYMQ14894 314 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 FAM45BPQ6NSW5 357 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 KLHDC10Q6PID8 442 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 RHBDF2Q6PJF5 856 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 GPR65Q8IYL9 337 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 FAM45AQ8TCE6 357 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 MCOLN3Q8TDD5 553 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 STYXQ8WUJ0 223 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 KLHL29Q96CT2 875 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 FEM1CQ96JP0 617 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 ILKAPQ9H0C8 392 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 FGFR1OP2Q9NVK5 253 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 RIC8BQ9NVN3 520 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 BAG5Q9UL15 447 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3DA0A087WVF3 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3IA0A087WXS9 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3EA0A087X179 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 A0A087X1B8 175 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3KA0A087X1G2 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3FA6NER0 549 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3LB9A6J9 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 PRPF4O43172 522 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 STC2O76061 302 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3HP0C7X1 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 EPCAMP16422 314 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 ITGB6P18564 788 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 HOXC8P31273 242 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 HALP42357 657 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 PTGIRP43119 386 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 IL2P60568 153 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 PITX1P78337 314 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 SEMA5AQ13591 1074 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 MAPRE2Q15555 327 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 CARD16Q5EG05 197 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3GQ6DHY5 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3CQ6IPX1 549 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 LRRC8EQ6NSJ5 796 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 RD3Q7Z3Z2 195 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 TBC1D3Q8IZP1 549 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 NKAPQ8N5F7 415 aaKnown RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 PCDH20Q8N6Y1 951 aaKnown RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 SYT11Q9BT88 431 aa8.34□□□□□ -1.07
PTPRD-204ENST00000397606 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
PTPRD-204ENST00000397606 RAD51BO15315 384 aa8.34□□□□□ -1.08
PTPRD-204ENST00000397606 RPP40O75818 363 aaKnown RBP8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms