RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SLC10A4Q96EP9 437 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 RMND5BQ96G75 393 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 OMDQ99983 421 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PAAF1Q9BRP4 392 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 FRMD8P1Q9BZ68 369 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 SEPT3Q9UH03 358 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 EBF1Q9UH73 591 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PDE4DIPQ5VU43 2346 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PTPRFP10586 1907 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 A0A0A0MRY4 1105 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 C19orf67A6NJJ6 358 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ASB14A6NK59 587 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 FAM159BA6NKW6 160 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TK2O00142 265 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 AIM2O14862 343 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 MDM4O15151 490 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 KMOO15229 486 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ZBTB24O43167 697 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 TIMM44O43615 452 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 NOL3O60936 208 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 GMNNO75496 209 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SPAG6O75602 509 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 MT-CYBP00156 380 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 MT-CO1P00395 513 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 LTFP02788 710 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ENO2P09104 434 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 MZF1P28698 734 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 EPHA3P29320 983 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TKTL1P51854 596 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 BCAT1P54687 386 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ITGADQ13349 1161 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PCLAFQ15004 111 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SF3B4Q15427 424 aaKnown RBP eCLIP5.08□□□□□ -1.63e-9■□□□□ 9.8
SSR1-202ENST00000397511 PPM1LQ5SGD2 360 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 NXNQ6DKJ4 435 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TTC23LQ6PF05 361 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 NAPRTQ6XQN6 538 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 MAVSQ7Z434 540 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 OSTM1Q86WC4 334 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 RNF135Q8IUD6 432 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 MMAAQ8IVH4 418 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 DEFB107AQ8IZN7 70 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 DCLK2Q8N568 766 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ANKRD52Q8NB46 1076 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 B3GALNT2Q8NCR0 500 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 GPRC5AQ8NFJ5 357 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SPATA22Q8NHS9 363 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SLC39A13Q96H72 371 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SPATA13Q96N96 652 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SLC2A11Q9BYW1 496 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SIAEQ9HAT2 523 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ADARB2Q9NS39 739 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 PNPLA3Q9NST1 481 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TMEM30AQ9NV96 361 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 DDIT4Q9NX09 232 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SIRPGQ9P1W8 387 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 VPS51Q9UID3 782 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 DAPK2Q9UIK4 370 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SLC39A10Q9ULF5 831 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ATP11BQ9Y2G3 1177 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 DOCK3Q8IZD9 2030 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ARHGEF37A1IGU5 675 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CASTOR2A6NHX0 329 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 H3BNH8 94 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 DFFAO00273 331 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 GCATO75600 419 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 HSPA4LO95757 839 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 GSRP00390 522 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MMP3P08254 477 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 ALOX5P09917 674 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 RALBP11234 206 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 FGF3P11487 239 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 ERCC2P18074 760 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CRHR1P34998 444 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 GRM5P41594 1212 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MATKP42679 507 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TUFMP49411 452 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 CXCR3P49682 368 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CDKL1Q00532 357 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CACNB2Q08289 660 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 LRP8Q14114 963 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 POU6F1Q14863 301 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TIGD2Q4W5G0 525 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 WDR45BQ5MNZ6 344 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 KIAA0319Q5VV43 1072 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TMEM198Q66K66 360 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MBLAC2Q68D91 279 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 FSTL4Q6MZW2 842 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 NOTUMQ6P988 496 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 XKR5Q6UX68 686 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 ARHGAP36Q6ZRI8 547 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 OTOP3Q7RTS5 596 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 NPWQ8N729 165 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SPERTQ8NA61 448 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 LILRB4Q8NHJ6 448 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 PPTC7Q8NI37 304 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 ZNF420Q8TAQ5 688 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 SUN5Q8TC36 379 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 USP13Q92995 863 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 CMTM5Q96DZ9 223 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms