RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SRCP12931 536 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 ARSAP15289 507 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 PSMA3P25788 255 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 ARCN1P48444 511 aaKnown RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 CBX1P83916 185 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 RETSATQ6NUM9 610 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 MARK2Q7KZI7 788 aaKnown RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 MFSD3Q96ES6 412 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 EXOC2Q96KP1 924 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 HAUS2Q9NVX0 235 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 HMX2A2RU54 273 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 POC1B-GALNT4F8VUJ3 575 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 UGT1A9O60656 530 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ADH5P11766 374 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ARNTP27540 789 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 KDELC2Q7Z4H8 507 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 CHFRQ96EP1 664 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 UGT1A7Q9HAW7 530 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 UGT1A10Q9HAW8 530 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 UGT1A8Q9HAW9 530 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SLC27A6Q9Y2P4 619 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 RPS6KL1Q9Y6S9 549 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF106Q9H2Y7 1883 aaKnown RBP12.84□□□□□ -0.35
TRIM39-204ENST00000396548 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 TRAFD1O14545 582 aaPredicted RBP12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ATP9BO43861 1147 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 HLA-DPA1P20036 260 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ADRA1DP25100 572 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SCNN1BP51168 640 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 CASC4Q6P4E1 433 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SRLQ86TD4 932 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 METTL3Q86U44 580 aaKnown RBP12.84□□□□□ -0.35
TRIM39-204ENST00000396548 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 RNF135Q8IUD6 432 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 MFSD6LQ8IWD5 586 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 MYO19Q96H55 970 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 CENPHQ9H3R5 247 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 SAMD15Q9P1V8 674 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
TRIM39-204ENST00000396548 ACTL7BQ9Y614 415 aa12.84□□□□□ -0.35
TRIM39-204ENST00000396548 CREB1P16220 341 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 NR1D1P20393 614 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 STK19P49842 368 aaPredicted RBP12.83□□□□□ -0.35
TRIM39-204ENST00000396548 TRAF2Q12933 501 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 POU6F1Q14863 301 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 ATAT1Q5SQI0 421 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 SLC25A41Q8N5S1 370 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.83□□□□□ -0.35
TRIM39-204ENST00000396548 E2F7Q96AV8 911 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 CERS2Q96G23 380 aa12.83□□□□□ -0.35
TRIM39-204ENST00000396548 LDB2O43679 373 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 SIN3BO75182 1162 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 PAPSS2O95340 614 aaPredicted RBP12.83□□□□□ -0.36
TRIM39-204ENST00000396548 NDST3O95803 873 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 FGF1P05230 155 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 LAMP2P13473 410 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 ACVR1Q04771 509 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 GEN1Q17RS7 908 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 ATXN7L2Q5T6C5 722 aaPredicted RBP12.83□□□□□ -0.36
TRIM39-204ENST00000396548 SLC26A11Q86WA9 606 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 LRRC6Q86X45 466 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 FAM76AQ8TAV0 307 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 SUSD6Q92537 303 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 CEP44Q9C0F1 390 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 POMKQ9H5K3 350 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 IL1RAPL1Q9NZN1 696 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 TBK1Q9UHD2 729 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 ARNTLO00327 626 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 PDHA1P08559 390 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 MSH2P43246 934 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 RHOAP61586 193 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 MESP2Q0VG99 397 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 NAB1Q13506 487 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 TEDDM1Q5T9Z0 273 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 SMRP1Q8NCR6 262 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 OR13J1Q8NGT2 312 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 ZNF669Q96BR6 464 aaPredicted RBP12.83□□□□□ -0.36
TRIM39-204ENST00000396548 STMN4Q9H169 189 aaPredicted RBP12.83□□□□□ -0.36
TRIM39-204ENST00000396548 SLC17A6Q9P2U8 582 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 SLC2A6Q9UGQ3 507 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 RAI2Q9Y5P3 530 aa12.83□□□□□ -0.36
TRIM39-204ENST00000396548 HTRA2O43464 458 aaPredicted RBP12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ADH1CP00326 375 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 BMP1P13497 986 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ALADP13716 330 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ECT2LQ008S8 904 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms