RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CACNA2D2Q9NY47 1150 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 MAP3K20Q9NYL2 800 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 PADI4Q9UM07 663 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SDHDO14521 159 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 MDM4O15151 490 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SERPINB7O75635 380 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 MLNP12872 115 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CHRM3P20309 590 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CDH3P22223 829 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CES1P23141 567 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 BCAP31P51572 246 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 BFSP2Q13515 415 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 DEFB106AQ8N104 65 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 PARP8Q8N3A8 854 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 RYBPQ8N488 228 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CNTD1Q8N815 330 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 BORCS5Q969J3 196 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 PPP1R10Q96QC0 940 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SEPHS2Q99611 448 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 NAT9Q9BTE0 207 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ADI1Q9BV57 179 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 UNC93B1Q9H1C4 597 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ACAD9Q9H845 621 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 TNFRSF12AQ9NP84 129 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SPAG4Q9NPE6 437 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SACM1LQ9NTJ5 587 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 OAZ3Q9UMX2 235 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ACOT9Q9Y305 439 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ST14Q9Y5Y6 855 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SQORQ9Y6N5 450 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ACKR2O00590 384 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TOR1BO14657 336 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SBK3P0C264 359 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 ATP6V1B2P21281 511 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SLC7A1P30825 629 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SLC12A2P55011 1212 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SEPT6Q14141 434 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 DPYSL2Q16555 572 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TRIM16LQ309B1 348 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 USP41Q3LFD5 358 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 HSDL1Q3SXM5 330 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 NHSL2Q5HYW2 709 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 FAM160B1Q5W0V3 765 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 KDM1BQ8NB78 822 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 CXorf38Q8TB03 319 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TBC1D15Q8TC07 691 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 DQX1Q8TE96 717 aaKnown RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 RNF139Q8WU17 664 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 PPP1R13LQ8WUF5 828 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 CELF6Q96J87 481 aaKnown RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 VPS50Q96JG6 964 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TCF12Q99081 682 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 ADNPQ9H2P0 1102 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 VPS45Q9NRW7 570 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SNX10Q9Y5X0 201 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 A0A087WZ62 844 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 ZCWPW2A0A1B0GU75 182 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 KANSL1LA0AUZ9 987 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 INPP4BO15327 924 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TIMM44O43615 452 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 CABYRO75952 493 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 JCHAINP01591 159 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 AHSGP02765 367 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SNRPB2P08579 225 aaKnown RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 MTHFD1P11586 935 aaKnown RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 NCK1P16333 377 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 PAX3P23760 479 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 HOXD12P35452 270 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 GJA5P36382 358 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 ZNF157P51786 506 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 OXCT1P55809 520 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 MERTKQ12866 999 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SLC10A6Q3KNW5 377 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 CCDC92Q53HC0 331 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TMEM126BQ8IUX1 230 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 CEP97Q8IW35 865 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 SLC7A5P1Q8MH63 180 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TMCO5AQ8N6Q1 288 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 GABPB2Q8TAK5 448 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TFAP2CQ92754 450 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 PPP1R14BQ96C90 147 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 FDXACB1Q9BRP7 624 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 NPLQ9BXD5 320 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
TRIM39-203ENST00000396547 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TBCCD1Q9NVR7 557 aa9.92□□□□□ -0.82
TRIM39-203ENST00000396547 TMEM247A6NEH6 219 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 M0QYT0 321 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 EI24O14681 340 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 SPTLC1O15269 473 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 MAN1A2O60476 641 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 VTNP04004 478 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 NFKB1P19838 968 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 GRM5P41594 1212 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 CDH13P55290 713 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 GSTM4Q03013 218 aa9.91□□□□□ -0.82
TRIM39-203ENST00000396547 VGLL4Q14135 290 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms