RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CXorf40AQ8TE69 158 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 GDAP1L1Q96MZ0 367 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 KLHL32Q96NJ5 620 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 PLCB1Q9NQ66 1216 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 TMEM248Q9NWD8 314 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 MFHAS1Q9Y4C4 1052 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 NAV2Q8IVL1 2488 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 NVLO15381 856 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 UGT2B4P06133 528 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 CTSEP14091 401 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 CSRP3P50461 194 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 HK3P52790 923 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 ELP6Q0PNE2 266 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 C1orf61Q13536 156 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 GRM3Q14832 879 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 TPD52L1Q16890 204 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 INO80DQ53TQ3 878 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 RWDD4Q6NW29 188 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 RAB11FIP2Q7L804 512 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 VPS36Q86VN1 386 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 GKN2Q86XP6 184 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 RBFAQ8N0V3 343 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 MLKLQ8NB16 471 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 CFAP57Q96MR6 1250 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 GFM1Q96RP9 751 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 TTYH3Q9C0H2 523 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 CAAP1Q9H8G2 361 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 TMPRSS4Q9NRS4 437 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 KIAA1468Q9P260 1216 aa17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 HEMK1Q9Y5R4 338 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-202ENST00000396521 KDELR3O43731 214 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 RASGRP1O95267 797 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 IGSF6O95976 241 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 CCKBRP32239 447 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 IGFALSP35858 605 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 ACVRL1P37023 503 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 DRAP1Q14919 205 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 LRRC14Q15048 493 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 KIAA1614Q5VZ46 1190 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 CRTC1Q6UUV9 634 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 NLRP14Q86W24 1093 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 ZNF677Q86XU0 584 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 EPAS1Q99814 870 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 CPEB1Q9BZB8 566 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 EDEM3Q9BZQ6 932 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 FAM117AQ9C073 453 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 CLPBQ9H078 707 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 NDST4Q9H3R1 872 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 SEPT10Q9P0V9 454 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 GULP1Q9UBP9 304 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 AHCTF1Q8WYP5 2266 aa17.72■□□□□ 0.43
EXOSC3-202ENST00000396521 D6RAR5 112 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 GOLGA8SH3BPF8 625 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 MMP20O60882 483 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 XPAP23025 273 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 SDC4P31431 198 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 SLC5A2P31639 672 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 PDX1P52945 283 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 AGERQ15109 404 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 KLHL40Q2TBA0 621 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 USP53Q70EK8 1073 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 STRADAQ7RTN6 431 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 TP53I13Q8NBR0 393 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 OR6K2Q8NGY2 324 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 TBC1D31Q96DN5 1066 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 SGF29Q96ES7 293 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 B3GNT4Q9C0J1 378 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 TCEAL2Q9H3H9 227 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 DONSONQ9NYP3 566 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 DNAI1Q9UI46 699 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 ITM2BQ9Y287 266 aa17.71■□□□□ 0.43
EXOSC3-202ENST00000396521 BUB1O43683 1085 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 JMJD7P0C870 316 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 PNLIPP16233 465 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 GKP32189 559 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 UGT1A5P35504 534 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 YBEYP58557 167 aaPredicted RBP17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 ATP11AP98196 1134 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 RAPGEF1Q13905 1077 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 TMEM52BQ4KMG9 183 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 VWA3BQ502W6 1294 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 HID1Q8IV36 788 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 ZSCAN1Q8NBB4 408 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 SEMA3CQ99985 751 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 SYNDIG1Q9H7V2 258 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 GGT7Q9UJ14 662 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 APPL1Q9UKG1 709 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 GPR34Q9UPC5 381 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 HECTD1Q9ULT8 2610 aa17.7■□□□□ 0.42
EXOSC3-202ENST00000396521 CFAP69A5D8W1 941 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 ARHGAP6O43182 974 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 TMCC1O94876 653 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 LRIG2O94898 1065 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 PLEKP08567 350 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 LIPCP11150 499 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 TIMP2P16035 220 aa17.69■□□□□ 0.42
EXOSC3-202ENST00000396521 CD82P27701 267 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms