RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SPDYCQ5MJ68 293 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 FAM182AQ5T1J6 154 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 CFAP58Q5T655 872 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 SUMF1Q8NBK3 374 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 AGAP3Q96P47 875 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 C10orf88Q9H8K7 445 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 CEP192Q8TEP8 1941 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 SDK1Q7Z5N4 2213 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 BCLAF3A2AJT9 711 aaKnown RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 FAM47DPA6NHR8 397 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 PROB1E7EW31 1015 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 PLRG1O43660 514 aaKnown RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 LMNAP02545 664 aaKnown RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 FGGP02679 453 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 DHPSP49366 369 aaPredicted RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 HS1BP3Q53T59 392 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 PAF1Q8N7H5 531 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 CADM4Q8NFZ8 388 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 OR2T34Q8NGX1 318 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 ARRDC2Q8TBH0 407 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 MAIP1Q8WWC4 291 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 FOXJ1Q92949 421 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 NKD2Q969F2 451 aaPredicted RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 TRIM44Q96DX7 344 aaPredicted RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 TEKT5Q96M29 485 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 WDR24Q96S15 920 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 PHOX2BQ99453 314 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 VAT1Q99536 393 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 FRMD8P1Q9BZ68 369 aaPredicted RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 PCED1AQ9H1Q7 454 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 KDM4CQ9H3R0 1056 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 C6orf106Q9H6K1 298 aaPredicted RBP19.39■□□□□ 0.69
HOXA9-202ENST00000396345 PCDHGC4Q9Y5F7 938 aa19.39■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3DA0A087WVF3 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3IA0A087WXS9 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3EA0A087X179 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3KA0A087X1G2 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TSPAN11A1L157 253 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3FA6NER0 549 aaPredicted RBP19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3LB9A6J9 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 SOCS5O75159 536 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 ZNF189O75820 626 aaPredicted RBP19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3HP0C7X1 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TIMP2P16035 220 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 XPAP23025 273 aaPredicted RBP19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TAS2R38P59533 333 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 NIPAL4Q0D2K0 466 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 LONRF2Q1L5Z9 754 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3GQ6DHY5 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 LAIR1Q6GTX8 287 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3CQ6IPX1 549 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 BRAT1Q6PJG6 821 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 ARMCX6Q7L4S7 300 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TTC7BQ86TV6 843 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 SLC41A1Q8IVJ1 513 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 TBC1D3Q8IZP1 549 aaPredicted RBP19.38■□□□□ 0.69
HOXA9-202ENST00000396345 ATG4AQ8WYN0 398 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 RAB7BQ96AH8 199 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 LOXL4Q96JB6 756 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 OSBPL9Q96SU4 736 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 GLOD4Q9HC38 313 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 KLHL8Q9P2G9 620 aaPredicted RBP19.38■□□□□ 0.69
HOXA9-202ENST00000396345 SNX12Q9UMY4 172 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 PIEZO1Q92508 2521 aa19.38■□□□□ 0.69
HOXA9-202ENST00000396345 PRR23AA6NEV1 266 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 METTL12A8MUP2 240 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 TRAFD1O14545 582 aaPredicted RBP19.37■□□□□ 0.69
HOXA9-202ENST00000396345 KCNN4O15554 427 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 STK10O94804 968 aaKnown RBP19.37■□□□□ 0.69
HOXA9-202ENST00000396345 SERPINF2P08697 491 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 PTGER3P43115 390 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 TRAF2Q12933 501 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 LYSMD4Q5XG99 296 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 ZNF567Q8N184 647 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 SLC35B2Q8TB61 432 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 PDCD6IPQ8WUM4 868 aaKnown RBP19.37■□□□□ 0.69
HOXA9-202ENST00000396345 C1orf54Q8WWF1 131 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 ECHDC3Q96DC8 303 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 HSPA12BQ96MM6 686 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 NAPGQ99747 312 aaPredicted RBP19.37■□□□□ 0.69
HOXA9-202ENST00000396345 SLC25A51Q9H1U9 297 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 PREBQ9HCU5 417 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 TRHDEQ9UKU6 1024 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 DNPEPQ9ULA0 475 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 RAI2Q9Y5P3 530 aa19.37■□□□□ 0.69
HOXA9-202ENST00000396345 VPS13AQ96RL7 3174 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 MEI4A8MW99 385 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 UPK3BL1B0FP48 263 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 UPK3BL2E5RIL1 263 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 HTRA2O43464 458 aaPredicted RBP19.36■□□□□ 0.69
HOXA9-202ENST00000396345 AP1G1O43747 822 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 LIASO43766 372 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 FSBPO95073 299 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 CD86P42081 329 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 ABL2P42684 1182 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 SUOXP51687 545 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 POLR2LP62875 67 aaKnown RBP19.36■□□□□ 0.69
HOXA9-202ENST00000396345 SKOR1P84550 965 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 IHHQ14623 411 aa19.36■□□□□ 0.69
HOXA9-202ENST00000396345 SIX1Q15475 284 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms