RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DKK3Q9UBP4 350 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 GOLGA4Q13439 2230 aaKnown RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 ZFHX4Q86UP3 3567 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 URB1O60287 2271 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 RASA4BC9J798 803 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 TK2O00142 265 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 RASA4O43374 803 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 LZTS3O60299 673 aaPredicted RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 MMP20O60882 483 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 GKP32189 559 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 ABL2P42684 1182 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 LSSP48449 732 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 ERVPABLB-1P60509 514 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 POLR2LP62875 67 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 LRRC14Q15048 493 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 FAM72AQ5TYM5 149 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 FAM72DQ6L9T8 149 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 BRAT1Q6PJG6 821 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 FAM72BQ86X60 149 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 PHACTR4Q8IZ21 702 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 LSM14AQ8ND56 463 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 ZNF641Q96N77 438 aaPredicted RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 WRAP53Q9BUR4 548 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 CPEB1Q9BZB8 566 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 NDFIP2Q9NV92 336 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
DDR1-229ENST00000396342 ITM2BQ9Y287 266 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 MFHAS1Q9Y4C4 1052 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 APC2O95996 2303 aa16.57■□□□□ 0.24
DDR1-229ENST00000396342 TEX51A0A1B0GUA7 166 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 TMX2-CTNND1H3BSU7 103 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 MUSKO15146 869 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 RAD51BO15315 384 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 CCP110O43303 1012 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 TCEA3O75764 348 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 RASGRP1O95267 797 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 GJB6O95452 261 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 MBD3O95983 291 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 MPOP05164 745 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 PSMA2P25787 234 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 ITPKBP27987 946 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 SERPINA4P29622 427 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 EIF4A3P38919 411 aaKnown RBP16.56■□□□□ 0.24
DDR1-229ENST00000396342 PEX5P50542 639 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 NDST2P52849 883 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 TMPRSS3P57727 454 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 PFN3P60673 137 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 SERINC3Q13530 473 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 ACAD10Q6JQN1 1059 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 MACC1Q6ZN28 852 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 GKN2Q86XP6 184 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 UMODL1-AS1Q8N2C9 162 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 SDR16C5Q8N3Y7 309 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 ARL14Q8N4G2 192 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 KCNE4Q8WWG9 221 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 HMCESQ96FZ2 354 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 VCPIP1Q96JH7 1222 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 TUBGCP5Q96RT8 1024 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 ATP13A3Q9H7F0 1226 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 SP110Q9HB58 689 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 WDR70Q9NW82 654 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 SIK3Q9Y2K2 1263 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 ACTL7AQ9Y615 435 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 PLXNA2O75051 1894 aa16.56■□□□□ 0.24
DDR1-229ENST00000396342 SMTNL1A8MU46 457 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 LMO7DNF2Z398 122 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 EEF2KO00418 725 aaKnown RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 TLX3O43711 291 aaPredicted RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 PRPSAP2O60256 369 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 KELP23276 732 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 ZNF135P52742 658 aaPredicted RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 CXADRP78310 365 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 SPIDRQ14159 915 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 FGL2Q14314 439 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 TAF1BQ53T94 588 aaPredicted RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 HID1Q8IV36 788 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 BBS5Q8N3I7 341 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 OR6C4Q8NGE1 309 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 NAF1Q96HR8 494 aaKnown RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 PCDHB18PQ96TA0 734 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 KLF6Q99612 283 aaPredicted RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 CINPQ9BW66 212 aaPredicted RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 SUV39H2Q9H5I1 410 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 DHX35Q9H5Z1 703 aaKnown RBP16.55■□□□□ 0.24
DDR1-229ENST00000396342 LMBRD1Q9NUN5 540 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 GULP1Q9UBP9 304 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 MYO6Q9UM54 1294 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 PCDHB1Q9Y5F3 818 aa16.55■□□□□ 0.24
DDR1-229ENST00000396342 WASH4PA8MWX3 477 aa16.54■□□□□ 0.24
DDR1-229ENST00000396342 CACNB4O00305 520 aaPredicted RBP16.54■□□□□ 0.24
DDR1-229ENST00000396342 AREL1O15033 823 aa16.54■□□□□ 0.24
DDR1-229ENST00000396342 ZW10O43264 779 aa16.54■□□□□ 0.24
DDR1-229ENST00000396342 PALMO75781 387 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms