RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ELK3P41970 407 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 CTSOP43234 321 aaPredicted RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 TNFRSF4P43489 277 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 STK19P49842 368 aaPredicted RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 SESN2P58004 480 aaPredicted RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 RPL26P61254 145 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 FAM193AP78312 1265 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 KDSRQ06136 332 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SPARCL1Q14515 664 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SLC1A5Q15758 541 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 TMEM215Q68D42 235 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 NLRP9Q7RTR0 991 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 CNPY4Q8N129 248 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 PAF1Q8N7H5 531 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 STAMBPL1Q96FJ0 436 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 PWWP2AQ96N64 755 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 EBNA1BP2Q99848 306 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 TDRD1Q9BXT4 1180 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SEMA4AQ9H3S1 761 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 PRKAG3Q9UGI9 489 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 RPL26L1Q9UNX3 145 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 RAI2Q9Y5P3 530 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 MAD1L1Q9Y6D9 718 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 A0A087WUV0 522 aaPredicted RBP13.82□□□□□ -0.2
VAPB-202ENST00000395802 TRIM24O15164 1050 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 USP12O75317 370 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 NDST3O95803 873 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 AGTP01019 485 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 POLBP06746 335 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 NUDT17P0C025 328 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 PGAM1P18669 254 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 GRIA1P42261 906 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 IFFO1Q0D2I5 559 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 TDGQ13569 410 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 KYNUQ16719 465 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 MYLK3Q32MK0 819 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 HSP90B2PQ58FF3 399 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 FAM182AQ5T1J6 154 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 ARMC12Q5T9G4 340 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 LRIG3Q6UXM1 1119 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 PPHLN1Q8NEY8 458 aaKnown RBP13.82□□□□□ -0.2
VAPB-202ENST00000395802 TTC8Q8TAM2 541 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 SIGLEC10Q96LC7 697 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 C9orf72Q96LT7 481 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
VAPB-202ENST00000395802 PPCSQ9HAB8 311 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 SLCO3A1Q9UIG8 710 aa13.82□□□□□ -0.2
VAPB-202ENST00000395802 ACSL3O95573 720 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 IVLP07476 585 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 RGRP47804 291 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 EPHB1P54762 984 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 POLR2LP62875 67 aaKnown RBP13.81□□□□□ -0.2
VAPB-202ENST00000395802 PTPRNQ16849 979 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 MSS51Q4VC12 460 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 FNDC3BQ53EP0 1204 aaKnown RBP13.81□□□□□ -0.2
VAPB-202ENST00000395802 PCID2Q5JVF3 399 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 C3orf62Q6ZUJ4 267 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 PHTF2Q8N3S3 785 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 GOLGA6L1Q8N7Z2 621 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 MAFAQ8NHW3 353 aaPredicted RBP13.81□□□□□ -0.2
VAPB-202ENST00000395802 CYB5D2Q8WUJ1 264 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 MRGPRX3Q96LB0 322 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 OSBPL1AQ9BXW6 950 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 VPS37BQ9H9H4 285 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 LRRC4CQ9HCJ2 640 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 NINJ2Q9NZG7 142 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 SUN2Q9UH99 717 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 CHMP2BQ9UQN3 213 aa13.81□□□□□ -0.2
VAPB-202ENST00000395802 EDDM13A0A1B0GTR0 161 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 HEATR9A2RTY3 570 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 GOLGA6L10A6NI86 522 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 WASH3PC4AMC7 463 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 PRRT4C9JH25 899 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 SPECC1L-ADORA2AF8WAN1 911 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 ZNF821O75541 412 aaPredicted RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 SRFP11831 508 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 DRD1P21728 446 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 ADRA1DP25100 572 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 MGAT1P26572 445 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 STX2P32856 288 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 CTHP32929 405 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 GRIA4P48058 902 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 PDE1BQ01064 536 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 GRSF1Q12849 480 aaKnown RBP eCLIP13.8□□□□□ -0.2
VAPB-202ENST00000395802 SLC29A2Q14542 456 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 ATXN7L2Q5T6C5 722 aaPredicted RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 UBAP2Q5T6F2 1119 aaKnown RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 SERPINA13PQ6UXR4 307 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 CYS1Q717R9 158 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 KDELC2Q7Z4H8 507 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 ANKMY2Q8IV38 441 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 GABPB2Q8TAK5 448 aaPredicted RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 APOL2Q9BQE5 337 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 HEPHQ9BQS7 1158 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 TNKS2Q9H2K2 1166 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 MRM3Q9HC36 420 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms