RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ZNHIT6Q9NWK9 470 aaKnown RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 DNAJC28Q9NX36 388 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 CWC15Q9P013 229 aaKnown RBP13.91□□□□□ -0.18
CXCL12-205ENST00000395794 LHX3Q9UBR4 397 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ANAPC7Q9UJX3 599 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 ITM2BQ9Y287 266 aa13.91□□□□□ -0.18
CXCL12-205ENST00000395794 A0A087X0T9 212 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 H3BM21 787 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 MYO1FO00160 1098 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 RFPL3O75679 317 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 TM7SF2O76062 418 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 DKK1O94907 266 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 GYPCP04921 128 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 FAM228BP0C875 321 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 CKMT2P17540 419 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 SERPINA4P29622 427 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 CASP14P31944 242 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 THOP1P52888 689 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 HNRNPKP61978 463 aaKnown RBP eCLIP13.9□□□□□ -0.18
CXCL12-205ENST00000395794 IL10RBQ08334 325 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 ZNF211Q13398 564 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-205ENST00000395794 FGL2Q14314 439 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 SMTNL2Q2TAL5 461 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 ALKBH5Q6P6C2 394 aaKnown RBP13.9□□□□□ -0.18
CXCL12-205ENST00000395794 BRAT1Q6PJG6 821 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 TMCO3Q6UWJ1 677 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 DHRS13Q6UX07 377 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 BMFQ96LC9 184 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 TUBGCP5Q96RT8 1024 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.18
CXCL12-205ENST00000395794 NUP85Q9BW27 656 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 XPO4Q9C0E2 1151 aaKnown RBP13.9□□□□□ -0.18
CXCL12-205ENST00000395794 SUV39H2Q9H5I1 410 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 ATP13A3Q9H7F0 1226 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 PDFQ9HBH1 243 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 EVA1BQ9NVM1 165 aa13.9□□□□□ -0.18
CXCL12-205ENST00000395794 TPRP12270 2363 aaKnown RBP13.9□□□□□ -0.18
CXCL12-205ENST00000395794 TMEM131Q92545 1883 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 POM121BA6NF01 834 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 AREL1O15033 823 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 RAD51BO15315 384 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 INSIG1O15503 277 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 MMP20O60882 483 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 KRT37O76014 449 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 PIGNO95427 931 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 CYP1A2P05177 515 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 TIMP2P16035 220 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 DGKAP23743 735 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 HNF1BP35680 557 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 CSNK1DP48730 415 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 RENBPP51606 427 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 DAB2P98082 770 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 DNAJC3Q13217 504 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 ILKQ13418 452 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 DPYSQ14117 519 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 PDE1CQ14123 709 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-205ENST00000395794 TRIM14Q14142 442 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 KRT81Q14533 505 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 SMAD1Q15797 465 aaKnown RBP13.89□□□□□ -0.19
CXCL12-205ENST00000395794 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 HADHQ16836 314 aaKnown RBP13.89□□□□□ -0.19
CXCL12-205ENST00000395794 LRRC73Q5JTD7 316 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 AFMIDQ63HM1 303 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 SPECC1LQ69YQ0 1117 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 CYP4V2Q6ZWL3 525 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-205ENST00000395794 SRLQ86TD4 932 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 PARGQ86W56 976 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 TMPRSS12Q86WS5 348 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 NIPA2Q8N8Q9 360 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 NSMCE1Q8WV22 266 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 TEKT4Q8WW24 435 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 TSPY26PQ9H489 355 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 DEF6Q9H4E7 631 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 CCDC86Q9H6F5 360 aaKnown RBP13.89□□□□□ -0.19
CXCL12-205ENST00000395794 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 GGT7Q9UJ14 662 aa13.89□□□□□ -0.19
CXCL12-205ENST00000395794 EPG5Q9HCE0 2579 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 SPTY2D1-AS1A0A0U1RR47 76 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 FFAR2O15552 330 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 PIAS2O75928 621 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 RARAP10276 462 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 JUPP14923 745 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 IL1R2P27930 398 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 SERPINB6P35237 376 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 ACADVLP49748 655 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 YPEL5P62699 121 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 POLR2LP62875 67 aaKnown RBP13.88□□□□□ -0.19
CXCL12-205ENST00000395794 BCL2L1Q07817 233 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 NSUN2Q08J23 767 aaKnown RBP eCLIP13.88□□□□□ -0.19
CXCL12-205ENST00000395794 UGP2Q16851 508 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 ZNF542PQ5EBM4 170 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 KANSL1Q7Z3B3 1105 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 CAMK1DQ8IU85 385 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 ARHGAP12Q8IWW6 846 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 SLC22A18ASQ8N1D0 253 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 SLC25A45Q8N413 288 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms