RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SF3A2Q15428 464 aaKnown RBP16.74■□□□□ 0.27
CXCL1-201ENST00000395761 WDR45BQ5MNZ6 344 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 SYCP2LQ5T4T6 812 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 MEI1Q5TIA1 1274 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 TCEAL6Q6IPX3 200 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 TIGD7Q6NT04 549 aaPredicted RBP16.74■□□□□ 0.27
CXCL1-201ENST00000395761 FBXL19Q6PCT2 694 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 BBS12Q6ZW61 710 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 UBL4BQ8N7F7 174 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 SNX19Q92543 992 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 TCEAL3Q969E4 200 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 FATE1Q969F0 183 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 MGME1Q9BQP7 344 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 ORAI3Q9BRQ5 295 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 OSBPL8Q9BZF1 889 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 MIR1-1HGQ9H1L0 117 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 SUV39H2Q9H5I1 410 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 EBF2Q9HAK2 575 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 RBM22Q9NW64 420 aaKnown RBP eCLIP16.74■□□□□ 0.27
CXCL1-201ENST00000395761 JRKLQ9Y4A0 524 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 TNRC6BQ9UPQ9 1833 aaKnown RBP16.73■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF806P0C7X5 589 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 TIMP2P16035 220 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 PTPN7P35236 360 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 HSPA9P38646 679 aaKnown RBP16.73■□□□□ 0.27
CXCL1-201ENST00000395761 ETF1P62495 437 aaKnown RBP16.73■□□□□ 0.27
CXCL1-201ENST00000395761 ITKQ08881 620 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 CCDC15Q0P6D6 951 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 AP1B1Q10567 949 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 CSRP2Q16527 193 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 LRRC73Q5JTD7 316 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 PEAR1Q5VY43 1037 aaPredicted RBP16.73■□□□□ 0.27
CXCL1-201ENST00000395761 TTC7BQ86TV6 843 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 SLC35F6Q8N357 371 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 BBS5Q8N3I7 341 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.73■□□□□ 0.27
CXCL1-201ENST00000395761 C1orf216Q8TAB5 229 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 P3H4Q92791 437 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 NUDCD1Q96RS6 583 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 TUBGCP5Q96RT8 1024 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 KDM4CQ9H3R0 1056 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 SCUBE2Q9NQ36 999 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 VPS45Q9NRW7 570 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 GGT7Q9UJ14 662 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 FADS3Q9Y5Q0 445 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 SHROOM3Q8TF72 1996 aa16.73■□□□□ 0.27
CXCL1-201ENST00000395761 FAM186AA6NE01 2351 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ESPNB1AK53 854 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 PPP1R12AO14974 1030 aaPredicted RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 SPINT1O43278 529 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 RNGTTO60942 597 aaKnown RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 LRP3O75074 770 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 HLA-DQB2P05538 268 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 MAT2AP31153 395 aaKnown RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 CCR5P51681 352 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 GNG11P61952 73 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 AP1S1P61966 158 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 IFI35P80217 286 aaPredicted RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ZBTB17Q13105 803 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 IHHQ14623 411 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 GRM3Q14832 879 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ZC3H18Q86VM9 953 aaKnown RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ZSWIM9Q86XI8 627 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ZCCHC9Q8N567 271 aaKnown RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 CNTD1Q8N815 330 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF641Q96N77 438 aaPredicted RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 IL12RB2Q99665 862 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 SEMA3CQ99985 751 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 CEP41Q9BYV8 373 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ATP13A3Q9H7F0 1226 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 PREBQ9HCU5 417 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 DKK3Q9UBP4 350 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 ITM2BQ9Y287 266 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 EFR3BQ9Y2G0 817 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 PCDHGC4Q9Y5F7 938 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.72■□□□□ 0.27
CXCL1-201ENST00000395761 GVINP1Q7Z2Y8 2422 aa16.72■□□□□ 0.27
CXCL1-201ENST00000395761 A0A1W2PQU0 124 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 TSPAN11A1L157 253 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 TRAFD1O14545 582 aaPredicted RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF500O60304 480 aaPredicted RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 PCDH8O95206 1070 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 CD27P26842 260 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 SERPINA4P29622 427 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 CETN2P41208 172 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 IRX4P78413 519 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 DSC2Q02487 901 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 BCL2L1Q07817 233 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 NIPAL4Q0D2K0 466 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 PRKD1Q15139 912 aaPredicted RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 TRIM61Q5EBN2 209 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 CCDC181Q5TID7 509 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 PRR23CQ6ZRP0 262 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 BZW1Q7L1Q6 419 aaKnown RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 TRIM69Q86WT6 500 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 TFB1MQ8WVM0 346 aaKnown RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 KLK6Q92876 244 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 FAM118BQ9BPY3 351 aa16.71■□□□□ 0.27
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