RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF789Q5FWF6 425 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 RWDD4Q6NW29 188 aaKnown RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 TMEM135Q86UB9 458 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 BBS5Q8N3I7 341 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 MAGEE2Q8TD90 523 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 C12orf42Q96LP6 360 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SEPHS2Q99611 448 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 MTG1Q9BT17 334 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SPAG4Q9NPE6 437 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 CSADQ9Y600 493 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SH3PXD2BA1X283 911 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 K7EPI3 171 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 PPP6CO00743 305 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 ATICP31939 592 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 CHRNA4P43681 627 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 ALDH3B2P48448 385 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 CLCN2P51788 898 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 TPI1P60174 286 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 ZNF470Q6ECI4 717 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 CYS1Q717R9 158 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 ZBTB8BQ8NAP8 495 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SETD4Q9NVD3 440 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 COL11A1P12107 1806 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 BTBD19C9JJ37 291 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 I6L893 689 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SRP72O76094 671 aaKnown RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 TXNP10599 105 aaKnown RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 STMN1P16949 149 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 GRM5P41594 1212 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 C21orf59P57076 290 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 TXNL4AP83876 142 aaKnown RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SULT2A1Q06520 285 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SLC12A1Q13621 1099 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 FAM83EQ2M2I3 478 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 PKDCCQ504Y2 493 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 C6orf10Q5SRN2 563 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SLC26A9Q7LBE3 791 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 GPR180Q86V85 440 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SPPL2BQ8TCT7 592 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 EMID1Q96A84 441 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 PBXIP1Q96AQ6 731 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 SPATC1LQ9H0A9 340 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 FAIMQ9NVQ4 179 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 EVLQ9UI08 416 aaPredicted RBP14.44□□□□□ -0.1
CLIP2-203ENST00000395060 CROTQ9UKG9 612 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 GJD2Q9UKL4 321 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 PCDHGA4Q9Y5G9 962 aa14.44□□□□□ -0.1
CLIP2-203ENST00000395060 POLR2AP24928 1970 aaKnown RBP14.43□□□□□ -0.1
CLIP2-203ENST00000395060 ZNF638Q14966 1978 aaKnown RBP14.43□□□□□ -0.1
CLIP2-203ENST00000395060 TRIM43BA6NCK2 446 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 SUPT7LO94864 414 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 SLC4A1P02730 911 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 APLP1P51693 650 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 ITGADQ13349 1161 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 BPIFB6Q8NFQ5 453 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 FAM167AQ96KS9 214 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 MED10Q9BTT4 135 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 EIF2AQ9BY44 585 aaKnown RBP14.43□□□□□ -0.1
CLIP2-203ENST00000395060 UNC93B1Q9H1C4 597 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 UPF3AQ9H1J1 476 aaKnown RBP14.43□□□□□ -0.1
CLIP2-203ENST00000395060 TBC1D23Q9NUY8 699 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 PRMT7Q9NVM4 692 aaPredicted RBP14.43□□□□□ -0.1
CLIP2-203ENST00000395060 NCKIPSDQ9NZQ3 722 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 DGKBQ9Y6T7 804 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 LRRC14BA6NHZ5 514 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 EI24O14681 340 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 INPP4BO15327 924 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 CLOCKO15516 846 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 ICAM3P32942 547 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 PTPN9P43378 593 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 NUP107P57740 925 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 BST2Q10589 180 aaKnown RBP14.43□□□□□ -0.1
CLIP2-203ENST00000395060 NHSL2Q5HYW2 709 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 LBX2Q6XYB7 198 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 CNTD1Q8N815 330 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 SHCBP1Q8NEM2 672 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 STYXQ8WUJ0 223 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 SGCDQ92629 289 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 ADI1Q9BV57 179 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 ZNF385DQ9H6B1 395 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 SLC38A7Q9NVC3 462 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 ADAM28Q9UKQ2 775 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 USP22Q9UPT9 525 aa14.43□□□□□ -0.1
CLIP2-203ENST00000395060 H3BMQ9 156 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 MAN1A2O60476 641 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 MATKP42679 507 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 MAGEA12P43365 314 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 BCAT1P54687 386 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 STX5Q13190 355 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 RAB39AQ14964 217 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 EPHX4Q8IUS5 362 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 ZC3H7AQ8IWR0 971 aaKnown RBP14.42□□□□□ -0.1
CLIP2-203ENST00000395060 RNF34Q969K3 372 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 COG8Q96MW5 612 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 EFHD1Q9BUP0 239 aa14.42□□□□□ -0.1
CLIP2-203ENST00000395060 SNX25Q9H3E2 840 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms