RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 FNIP1Q8TF40 1166 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 CENPTQ96BT3 561 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 ZNF653Q96CK0 615 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 NXPE2Q96DL1 559 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 LENG8Q96PV6 779 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 EPAS1Q99814 870 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 TCEAL2Q9H3H9 227 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 DYRK4Q9NR20 520 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 FTSJ1Q9UET6 329 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 HS3ST3A1Q9Y663 406 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 ADAMTS20P59510 1910 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 DSPP15924 2871 aaKnown RBP8.96□□□□□ -0.97
ATG4A-205ENST00000394892 SPTY2D1-AS1A0A0U1RR47 76 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 A0A1W2PQJ5 194 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 TTC24A2A3L6 582 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 TK2O00142 265 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 EEF2KO00418 725 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 FGF10O15520 208 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 PIAS2O75928 621 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 NEBLO76041 1014 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 SERPINC1P01008 464 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 CCDC172P0C7W6 258 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 JUPP14923 745 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 AMPD1P23109 780 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 IL4RP24394 825 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 ARRB1P49407 418 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 AIF1P55008 147 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 TPI1P60174 286 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 RHOAP61586 193 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 SNRPD1P62314 119 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 RPS21P63220 83 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 SLC25A11Q02978 314 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 IHHQ14623 411 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 ZSCAN23Q3MJ62 389 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 FILIP1LQ4L180 1135 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 SLC45A4Q5BKX6 768 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 KIAA1161Q6NSJ0 714 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 KYAT3Q6YP21 454 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 CAMK1DQ8IU85 385 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 PELI3Q8N2H9 469 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 PGBD5Q8N414 524 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 RYBPQ8N488 228 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 TP53I13Q8NBR0 393 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 TSEN2Q8NCE0 465 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 CPLX3Q8WVH0 158 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 ASB12Q8WXK4 309 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 PPP1R16AQ96I34 528 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 FEM1CQ96JP0 617 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 GDAP1L1Q96MZ0 367 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 CALN1Q9BXU9 219 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 CPEB1Q9BZB8 566 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 THAP2Q9H0W7 228 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 IFNKQ9P0W0 207 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 MYO1AQ9UBC5 1043 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 DKK3Q9UBP4 350 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 CAPN11Q9UMQ6 739 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 COQ6Q9Y2Z9 468 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 PCDHGA1Q9Y5H4 931 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 TMEM131Q92545 1883 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 NYNRINQ9P2P1 1898 aaKnown RBP8.96□□□□□ -0.98
ATG4A-205ENST00000394892 APC2O95996 2303 aa8.96□□□□□ -0.98
ATG4A-205ENST00000394892 PLXNB3Q9ULL4 1909 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 DOCK4Q8N1I0 1966 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ARID1BQ8NFD5 2236 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ITPR1Q14643 2758 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ZSCAN5CA6NGD5 496 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 A6NNZ2 444 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 TRAFD1O14545 582 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 YKT6O15498 198 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 TSPAN6O43657 245 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 GCATO75600 419 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 CYP1A2P05177 515 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 CELA2BP08218 269 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 CD48P09326 243 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 C1SP09871 688 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 RARAP10276 462 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 HTR7P34969 479 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 PCK1P35558 622 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 HCAR3P49019 387 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ARSEP51690 589 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 NDST2P52849 883 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 UBASH3AP57075 661 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 GEMIN4P57678 1058 aaKnown RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF211Q13398 564 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 PTPRRQ15256 657 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 DPYSL2Q16555 572 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 SMTNL2Q2TAL5 461 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ASTE1Q2TB18 679 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 WSCD2Q2TBF2 565 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 TMEM52BQ4KMG9 183 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ATP13A4Q4VNC1 1196 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 PPP6R3Q5H9R7 873 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 FAM182AQ5T1J6 154 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 POLNQ7Z5Q5 900 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 PTAR1Q7Z6K3 402 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 TTC7BQ86TV6 843 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 RBFAQ8N0V3 343 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 OR4C6Q8NH72 309 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 CASKIN2Q8WXE0 1202 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms