RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PCSK6P29122 969 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 TAF6P49848 677 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 INHBCP55103 352 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 BST2Q10589 180 aaKnown RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 GTF2H3Q13889 308 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 INPP5AQ14642 412 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 PCYOX1LQ8NBM8 494 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 TRPC4APQ8TEL6 797 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 LRRC39Q96DD0 335 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 MAML3Q96JK9 1138 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 KLHL5Q96PQ7 755 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 GAD1Q99259 594 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 HPS4Q9NQG7 708 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 STK39Q9UEW8 545 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 UBQLN1Q9UMX0 589 aaKnown RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 PTGDR2Q9Y5Y4 395 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 LOXHD1Q8IVV2 1947 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 PAMP19021 973 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 L1CAMP32004 1257 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 GRM5P41594 1212 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 SLC18A1P54219 525 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 SDHAF4Q5VUM1 108 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 OGFOD2Q6N063 350 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 HFE2Q6ZVN8 426 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 PSTKQ8IV42 348 aaKnown RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 TNIP3Q96KP6 325 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 ABHD16BQ9H3Z7 469 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 KCNH4Q9UQ05 1017 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 AOC1P19801 751 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 SOX4Q06945 474 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 DRAXINQ8NBI3 349 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 OR10Q1Q8NGQ4 319 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 RTKNQ9BST9 563 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 TLE6Q9H808 572 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 RAP2CQ9Y3L5 183 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 NME7Q9Y5B8 376 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 SNX5Q9Y5X3 404 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 A0A1W2PPW3 197 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 OR51F1A6NGY5 319 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 CAPN14A8MX76 684 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 H3BMM5 538 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 BEST1O76090 585 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 CNTFP26441 200 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 CCR1P32246 355 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 PCYT1AP49585 367 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 ADGRE1Q14246 886 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 SHCBP1Q8NEM2 672 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 FBXO30Q8TB52 745 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 VPS33AQ96AX1 596 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 ZFRQ96KR1 1074 aaKnown RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 SLC2A6Q9UGQ3 507 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 POMCP01189 267 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 FUT4P22083 530 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 TKTP29401 623 aaKnown RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 TAS2R39P59534 338 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 MFSD10Q14728 455 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF792Q3KQV3 632 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 DCAF4L1Q3SXM0 396 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 TAS2R42Q7RTR8 314 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 NRBF2Q96F24 287 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 IFT43Q96FT9 208 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 CYP2S1Q96SQ9 504 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 SENP6Q9GZR1 1112 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 C6orf203Q9P0P8 240 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-202ENST00000394820 RAD54BQ9Y620 910 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 NUP205Q92621 2012 aa13.33□□□□□ -0.28
NFKB1-202ENST00000394820 FAM159BA6NKW6 160 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 E7ESA3 106 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 M0QZ92 97 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 SIX3O95343 332 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 IL4RP24394 825 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 PIK3CGP48736 1102 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 SPIDRQ14159 915 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 GNASQ5JWF2 1037 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FIG4Q92562 907 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 SP110Q9HB58 689 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 DAPK2Q9UIK4 370 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 CDC14AQ9UNH5 594 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 COPG1Q9Y678 874 aaKnown RBP13.32□□□□□ -0.28
NFKB1-202ENST00000394820 FER1L6Q2WGJ9 1857 aa13.32□□□□□ -0.28
NFKB1-202ENST00000394820 TRPC5OSA6NMA1 111 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms