RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NCAM2O15394 837 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 DDHD2O94830 711 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 SPATA31D3P0C874 917 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 UQCRBP14927 111 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 FOLH1Q04609 750 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 PTPRCAPQ14761 206 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 GSTA3Q16772 222 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 MMEL1Q495T6 779 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 SPATA31D4Q6ZUB0 917 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ADGRG6Q86SQ4 1221 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 BHLHE22Q8NFJ8 381 aaPredicted RBP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 FCRL2Q96LA5 508 aaPredicted RBP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 GLT1D1Q96MS3 346 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 POMKQ9H5K3 350 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 CSNK1G1Q9HCP0 422 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 RBM22Q9NW64 420 aaKnown RBP eCLIP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 OSER1Q9NX31 292 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 GTSE1Q9NYZ3 720 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ACOT9Q9Y305 439 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 MYO16Q9Y6X6 1858 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 M0QZQ0 153 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 CABYRO75952 493 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 GPR15P49685 360 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 RAB10P61026 200 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 CYLC2Q14093 348 aaPredicted RBP13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 CNPY1Q3B7I2 92 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 KYQ8NBH2 561 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 RAET1EQ8TD07 263 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 LINC01599Q8WXQ3 324 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PHF21BQ96EK2 531 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 CAPNS2Q96L46 248 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 MRGPRX2Q96LB1 330 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PCDHAC1Q9H158 963 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 DMAP1Q9NPF5 467 aaPredicted RBP13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PRG3Q9Y2Y8 225 aaPredicted RBP13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 KCTD3Q9Y597 815 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 TCAF2A6NFQ2 919 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 SDHDO14521 159 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 CYP11A1P05108 521 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 KCNC1P48547 511 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PDK3Q15120 406 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PCID2Q5JVF3 399 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 DCLRE1AQ6PJP8 1040 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 ACAD11Q709F0 780 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 SATL1Q86VE3 508 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PQLC1Q8N2U9 271 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 GALNT4Q8N4A0 578 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 FAM110BQ8TC76 370 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 GPR152Q8TDT2 470 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 ANKRD49Q8WVL7 239 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 DCUN1D1Q96GG9 259 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 PKMYT1Q99640 499 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 WDR41Q9HAD4 459 aa13.61□□□□□ -0.23
GTF2F1-201ENST00000394456 ERI2A8K979 691 aaKnown RBP13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 AHCYL1O43865 530 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 THRAP10827 490 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 PPARGP37231 505 aaPredicted RBP13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 RALGDSQ12967 914 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 MED21Q13503 144 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 FLOT2Q14254 428 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 PRPSAP1Q14558 356 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 CLLU1OSQ5K130 101 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 HHIPL1Q96JK4 782 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 PKP2Q99959 881 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 IGSF5Q9NSI5 407 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 STK39Q9UEW8 545 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 CDYLQ9Y232 598 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 DTNAQ9Y4J8 743 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 ATP6AP2A0A1C7CYW4 349 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 MAGEB16A2A368 324 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 C9JVG2 144 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 J3KR12 359 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 KIF3CO14782 793 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 DNAJA2O60884 412 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 ATP6AP2O75787 350 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 STMN1P16949 149 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 ADRA1AP35348 466 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 CDKL1Q00532 357 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 TSPY1Q01534 308 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 YWHAHQ04917 246 aaPredicted RBP13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 RASIP1Q5U651 963 aa13.6□□□□□ -0.23
GTF2F1-201ENST00000394456 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms