RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 CHKBQ9Y259 395 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 C5orf67F2Z3F1 127 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 K7ERQ8 282 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 ALADP13716 330 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 LIMK2P53671 638 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 RGS9BPQ6ZS82 235 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 OR13J1Q8NGT2 312 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 SH3RF2Q8TEC5 729 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 IFT43Q96FT9 208 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 GCNAQ96QF7 691 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 TRIB3Q96RU7 358 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 VPS11Q9H270 941 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 MRM3Q9HC36 420 aaKnown RBP19.23■□□□□ 0.67
CLDND1-203ENST00000394181 SNX15Q9NRS6 342 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 ZNF358Q9NW07 568 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 EMCNQ9ULC0 261 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 TMCC1O94876 653 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 RHOP08100 348 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 SERPINF2P08697 491 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 BGNP21810 368 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 TYK2P29597 1187 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 SPRP35270 261 aaPredicted RBP19.23■□□□□ 0.67
CLDND1-203ENST00000394181 SERPINB4P48594 390 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 ARSDP51689 593 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 CDH18Q13634 790 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 TSTD2Q5T7W7 516 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 CES4AQ5XG92 561 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 MFN1Q8IWA4 741 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 PTCD2Q8WV60 388 aaKnown RBP19.23■□□□□ 0.67
CLDND1-203ENST00000394181 VPS51Q9UID3 782 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 PCDHGC4Q9Y5F7 938 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 ARL5AQ9Y689 179 aa19.23■□□□□ 0.67
CLDND1-203ENST00000394181 XIRP2A4UGR9 3374 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 AURKAO14965 403 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 INSIG1O15503 277 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 PDHA1P08559 390 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 GRM3Q14832 879 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 PTPRRQ15256 657 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 CCDC197Q8NCU1 140 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 VPS39Q96JC1 886 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 FEM1CQ96JP0 617 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 CABS1Q96KC9 395 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 ZSWIM3Q96MP5 696 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 NSRP1Q9H0G5 558 aaKnown RBP19.22■□□□□ 0.67
CLDND1-203ENST00000394181 MKS1Q9NXB0 559 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 PHTF1Q9UMS5 762 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 FCF1Q9Y324 198 aaKnown RBP19.22■□□□□ 0.67
CLDND1-203ENST00000394181 MIA3Q5JRA6 1907 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 HEATR9A2RTY3 570 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 MROH6A6NGR9 719 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 LDB2O43679 373 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 BMP1P13497 986 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 PTPN2P17706 415 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 SLC1A2P43004 574 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 EPHA5P54756 1037 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 ZC3HC1Q86WB0 502 aaKnown RBP19.22■□□□□ 0.67
CLDND1-203ENST00000394181 MFSD6LQ8IWD5 586 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 CMTM8Q8IZV2 173 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 BLOC1S5Q8TDH9 187 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 MANSC1Q9H8J5 431 aa19.22■□□□□ 0.67
CLDND1-203ENST00000394181 SZT2Q5T011 3432 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 GSRP00390 522 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 PRLP01236 227 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 SAT1P21673 171 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 TMPRSS15P98073 1019 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 IRF9Q00978 393 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 UBE3AQ05086 875 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 SHHQ15465 462 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 ZNF789Q5FWF6 425 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 ADGRD2Q7Z7M1 963 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 CNTN4Q8IWV2 1026 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 PLD6Q8N2A8 252 aaKnown RBP19.21■□□□□ 0.67
CLDND1-203ENST00000394181 BBS5Q8N3I7 341 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 USP13Q92995 863 aaPredicted RBP19.21■□□□□ 0.67
CLDND1-203ENST00000394181 RANBP9Q96S59 729 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 SUDS3Q9H7L9 328 aaPredicted RBP19.21■□□□□ 0.67
CLDND1-203ENST00000394181 SCUBE2Q9NQ36 999 aa19.21■□□□□ 0.67
CLDND1-203ENST00000394181 TYW5A2RUC4 315 aaKnown RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 OR51F1A6NGY5 319 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 SMAD6O43541 496 aaKnown RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 EDF1O60869 148 aaKnown RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 CD70P32970 193 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 PBX2P40425 430 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 MAGEA12P43365 314 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 RFTN1Q14699 578 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 ATXN7L2Q5T6C5 722 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 N4BP2L1Q5TBK1 243 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 ZNF470Q6ECI4 717 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 KIAA0930Q6ICG6 404 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 ZNF783Q6ZMS7 281 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 OTOAQ7RTW8 1153 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 SPATA21Q7Z572 469 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 GRASPQ7Z6J2 395 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 LDB1Q86U70 411 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-203ENST00000394181 CCDC63Q8NA47 563 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 ACMSDQ8TDX5 336 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 LHX3Q9UBR4 397 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 SLC39A10Q9ULF5 831 aa19.2■□□□□ 0.66
CLDND1-203ENST00000394181 ARHGAP26Q9UNA1 814 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms