RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TRIM10Q9UDY6 481 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 INTUQ9ULD6 942 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 ANKRD6Q9Y2G4 727 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPAG17Q6Q759 2223 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 PLXNA2O75051 1894 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 NUP205Q92621 2012 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 CEP250Q9BV73 2442 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPEGQ15772 3267 aa7.76□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPTBN4Q9H254 2564 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 IGLON5A6NGN9 336 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 GOLGA8CPA6NN73 597 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 A8MX80 341 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 NEMP1O14524 444 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SH3BP5O60239 455 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 MMP20O60882 483 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 KCNK5O95279 499 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 PAK4O96013 591 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 KRT10P13645 584 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 CD59P13987 128 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SDHBP21912 280 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 CD38P28907 300 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 GARSP41250 739 aaKnown RBP7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 CTSKP43235 329 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 NOVA1P51513 510 aaKnown RBP7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 C21orf59P57076 290 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 FAM193AP78312 1265 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 RAD51Q06609 339 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 ADCY2Q08462 1091 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 GALNT2Q10471 571 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 PTPRRQ15256 657 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 TEAD4Q15561 434 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMEM259Q4ZIN3 620 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SETMARQ53H47 684 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 MFSD7Q6UXD7 560 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 TTC7BQ86TV6 843 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPATS2Q86XZ4 545 aaKnown RBP7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 RFX6Q8HWS3 928 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 MAP7D3Q8IWC1 876 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 RHOT1Q8IXI2 618 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 PLD5Q8N7P1 536 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 TPCN2Q8NHX9 752 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 KRT35Q92764 455 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 LRIG1Q96JA1 1093 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 RNF157Q96PX1 679 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SMIM14Q96QK8 99 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 MFRPQ9BY79 579 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 CEP41Q9BYV8 373 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 KDM4CQ9H3R0 1056 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SUV39H2Q9H5I1 410 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 NT5MQ9NPB1 228 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 DNAAF2Q9NVR5 837 aaKnown RBP7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 DTLQ9NZJ0 730 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 LCMT1Q9UIC8 334 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 COQ6Q9Y2Z9 468 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 TTLL3Q9Y4R7 772 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 HEY1Q9Y5J3 304 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 ALG6Q9Y672 507 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 CEP192Q8TEP8 1941 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 ADAMTS9Q9P2N4 1935 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 CHD5Q8TDI0 1954 aa7.75□□□□□ -1.17
HMGB3P1-201ENST00000393368 A0A0U1RQS6 177 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPAARA0A1B0GVQ0 90 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TSPAN11A1L157 253 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 MACROD2A1Z1Q3 448 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 UPK3BL1B0FP48 263 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 UPK3BL2E5RIL1 263 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 KCNK1O00180 336 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TLR4O00206 839 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 APOL1O14791 398 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 AREL1O15033 823 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 VILLO15195 856 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SDC3O75056 442 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 IPO7O95373 1038 aaKnown RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 CER1O95813 267 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 HLA-DQB2P05538 268 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 THEGLP0DJG4 465 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 PECAM1P16284 738 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 CR2P20023 1033 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SERPINA4P29622 427 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC1A1P43005 524 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 MMP13P45452 471 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 VAV2P52735 878 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 HADHBP55084 474 aaKnown RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 NAP1L1P55209 391 aaKnown RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 NXPH1P58417 271 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 RPS21P63220 83 aaKnown RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 ITKQ08881 620 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCDC15Q0P6D6 951 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TRAF2Q12933 501 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 IHHQ14623 411 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 RFTN1Q14699 578 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 STAT4Q14765 748 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 SHBQ15464 509 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 TPRG1LQ5T0D9 272 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 CFAP58Q5T655 872 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 MARC1Q5VT66 337 aa7.74□□□□□ -1.17
HMGB3P1-201ENST00000393368 KAZNQ674X7 775 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms