RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 ZBTB37Q5TC79 503 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 FHL5Q5TD97 284 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 PM20D1Q6GTS8 502 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 GUSBP11Q6P575 273 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 RFWD3Q6PCD5 774 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 UBE3DQ7Z6J8 389 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 PIGZQ86VD9 579 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 PARGQ86W56 976 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 HORMAD1Q86X24 394 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 ANKRD52Q8NB46 1076 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 RNF214Q8ND24 703 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 OR6C4Q8NGE1 309 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 LMX1AQ8TE12 382 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 PARD3BQ8TEW8 1205 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 KCTD13Q8WZ19 329 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 PPP1R16AQ96I34 528 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 FAM46AQ96IP4 442 aaKnown RBP8.06□□□□□ -1.12
CASP4-201ENST00000393150 FEM1CQ96JP0 617 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 RPL10LQ96L21 214 aaKnown RBP8.06□□□□□ -1.12
CASP4-201ENST00000393150 HAPLN3Q96S86 360 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 ACSL6Q9UKU0 697 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 SRPK3Q9UPE1 567 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 AP4E1Q9UPM8 1137 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 ITIH6Q6UXX5 1313 aa8.06□□□□□ -1.12
CASP4-201ENST00000393150 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 A0A1W2PQC6 194 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 PRAMEF27A3QJZ7 478 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 LRRIQ3A6PVS8 624 aaPredicted RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 FPGTO14772 594 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 FANCGO15287 622 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 VPS4BO75351 444 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 NEBLO76041 1014 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 LUC7L3O95232 432 aaKnown RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 HTR3BO95264 441 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 ASS1P00966 412 aaKnown RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 APOEP02649 317 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 CSF2P04141 144 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 KRT13P13646 458 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 PRLRP16471 622 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 GJB2P29033 226 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 UGT1A5P35504 534 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 CASP4P49662 377 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 BLKP51451 505 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 THOP1P52888 689 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 YWHAEP62258 255 aaKnown RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 RPS21P63220 83 aaKnown RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 CNTN1Q12860 1018 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 FGL2Q14314 439 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 IGFBP7Q16270 282 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 KNOP1Q1ED39 458 aaKnown RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 SKIDA1Q1XH10 827 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 DEFB133Q30KQ1 61 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 ZNF542PQ5EBM4 170 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 CRTC1Q6UUV9 634 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 C12orf56Q8IXR9 622 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 PDILTQ8N807 584 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 IQUBQ8NA54 791 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 TMEM145Q8NBT3 493 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 ZNF548Q8NEK5 533 aaPredicted RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 KLK6Q92876 244 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 ERCC4Q92889 916 aaPredicted RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 PTPRN2Q92932 1015 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 P2RY11Q96G91 374 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 MEGF10Q96KG7 1140 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 CCDC3Q9BQI4 270 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 ULBP1Q9BZM6 244 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 SDCBP2Q9H190 292 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 EPN3Q9H201 632 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 GULP1Q9UBP9 304 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 PLEKHB1Q9UF11 243 aaPredicted RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 PISDQ9UG56 409 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 HMGXB4Q9UGU5 601 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 SLCO3A1Q9UIG8 710 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 PADI4Q9UM07 663 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 VPS4AQ9UN37 437 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 BOD1L1Q8NFC6 3051 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 DOPEY1Q5JWR5 2465 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 PLXNA2O75051 1894 aa8.05□□□□□ -1.12
CASP4-201ENST00000393150 TDRD6O60522 2096 aaKnown RBP8.05□□□□□ -1.12
CASP4-201ENST00000393150 STMND1H3BQB6 276 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 KPNA3O00505 521 aaPredicted RBP8.04□□□□□ -1.12
CASP4-201ENST00000393150 NEMP1O14524 444 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 XPO1O14980 1071 aaKnown RBP8.04□□□□□ -1.12
CASP4-201ENST00000393150 HLA-DRAP01903 254 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 PRNPP04156 253 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 NME1P15531 152 aaKnown RBP8.04□□□□□ -1.12
CASP4-201ENST00000393150 PDCP20941 246 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 DRD3P35462 400 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 ETFBP38117 255 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 ASPAP45381 313 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 COPB1P53618 953 aaKnown RBP8.04□□□□□ -1.12
CASP4-201ENST00000393150 POLE2P56282 527 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 BST2Q10589 180 aaKnown RBP8.04□□□□□ -1.12
CASP4-201ENST00000393150 MTA1Q13330 715 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 ZACNQ401N2 412 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 RAB41Q5JT25 222 aa8.04□□□□□ -1.12
CASP4-201ENST00000393150 RABGAP1LQ5R372 815 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms