RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
PTN-202ENST00000393083 EPS8L3Q8TE67 593 aaKnown RBP13.75□□□□□ -0.21
PTN-202ENST00000393083 ABCB8Q9NUT2 735 aa13.75□□□□□ -0.21
PTN-202ENST00000393083 GGA2Q9UJY4 613 aa13.75□□□□□ -0.21
PTN-202ENST00000393083 H0Y626 953 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 PSMD3O43242 534 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 SUN1O94901 812 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 PABPC1P11940 636 aaKnown RBP13.74□□□□□ -0.21
PTN-202ENST00000393083 TSHRP16473 764 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 SSTR1P30872 391 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 MMP13P45452 471 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 OXCT1P55809 520 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 GPX6P59796 221 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 SLC10A7Q0GE19 358 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 LMAN2Q12907 356 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 CDH18Q13634 790 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 STAT4Q14765 748 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 C2orf27AQ580R0 203 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 MARC1Q5VT66 337 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 KCTD11Q693B1 232 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
PTN-202ENST00000393083 IGDCC3Q8IVU1 814 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 IL17RCQ8NAC3 791 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 LRRC39Q96DD0 335 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 CFAP36Q96G28 342 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 OXNAD1Q96HP4 312 aaPredicted RBP13.74□□□□□ -0.21
PTN-202ENST00000393083 PPP1R2P1Q96PQ5 205 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 FCRL5Q96RD9 977 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 SPON2Q9BUD6 331 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 TMEM109Q9BVC6 243 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 LRRC40Q9H9A6 602 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 PDFQ9HBH1 243 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 ATP13A1Q9HD20 1204 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 NT5MQ9NPB1 228 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 POLR3BQ9NW08 1133 aaPredicted RBP13.74□□□□□ -0.21
PTN-202ENST00000393083 SPATA6Q9NWH7 488 aaPredicted RBP13.74□□□□□ -0.21
PTN-202ENST00000393083 ELOVL2Q9NXB9 296 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 UBP1Q9NZI7 540 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 VPS18Q9P253 973 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 INTS6Q9UL03 887 aaKnown RBP13.74□□□□□ -0.21
PTN-202ENST00000393083 TBC1D30Q9Y2I9 924 aa13.74□□□□□ -0.21
PTN-202ENST00000393083 TLDC2A0PJX2 215 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 RASGRF2O14827 1237 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 POLR3GO15318 223 aaPredicted RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 ANXA9O76027 345 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 TIE1P35590 1138 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 ETFBP38117 255 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 SLCO1A2P46721 670 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 GEMP55040 296 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 SATB1Q01826 763 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 OLIG2Q13516 323 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 ZNF235Q14590 738 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 EIF4HQ15056 248 aaKnown RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 LONRF1Q17RB8 773 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 AGBL2Q5U5Z8 902 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 RNF219Q5W0B1 726 aaPredicted RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 EGFLAMQ63HQ2 1017 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 LEKR1Q6ZMV7 388 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 MPP5Q8N3R9 675 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 TEX26Q8N6G2 289 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 OR52K1Q8NGK4 314 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 SPATA22Q8NHS9 363 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 WFIKKN2Q8TEU8 576 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 ATP6V1G3Q96LB4 118 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 CCDC77Q9BR77 488 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 ROPN1BQ9BZX4 212 aaPredicted RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 ROPN1Q9HAT0 212 aaPredicted RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 ZDHHC4Q9NPG8 344 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 PRMT8Q9NR22 394 aaPredicted RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 PIH1D1Q9NWS0 290 aaKnown RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 KIAA1522Q9P206 1035 aaPredicted RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 BCCIPQ9P287 314 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTN-202ENST00000393083 AAR2Q9Y312 384 aaKnown RBP13.73□□□□□ -0.21
PTN-202ENST00000393083 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 WDFY4Q6ZS81 3184 aa13.73□□□□□ -0.21
PTN-202ENST00000393083 ATG2BQ96BY7 2078 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 CACNA1IQ9P0X4 2223 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 EXOC1LA0A1B0GW35 172 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 HMGB1P1B2RPK0 211 aaPredicted RBP13.72□□□□□ -0.21
PTN-202ENST00000393083 TIMM44O43615 452 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 KDELR3O43731 214 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 ADAM23O75077 832 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 ATG13O75143 517 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 USP12O75317 370 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
PTN-202ENST00000393083 HNRNPLP14866 589 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTN-202ENST00000393083 MGAT1P26572 445 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 PLK1P53350 603 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 SESN2P58004 480 aaPredicted RBP13.72□□□□□ -0.21
PTN-202ENST00000393083 MAXP61244 160 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 CBX1P83916 185 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 ITKQ08881 620 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 FUT11Q495W5 492 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 HSF5Q4G112 596 aaPredicted RBP13.72□□□□□ -0.21
PTN-202ENST00000393083 KCTD16Q68DU8 428 aa13.72□□□□□ -0.21
PTN-202ENST00000393083 NAPEPLDQ6IQ20 393 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms