RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PTPRAP18433 802 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 SERPINA4P29622 427 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 TTPAP49638 278 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ATP12AP54707 1039 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 CDC42P60953 191 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 DMPKQ09013 629 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 SFSWAPQ12872 951 aaKnown RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 NOMO1Q15155 1222 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 EEF1DP3Q658K8 133 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 SCIMPQ6UWF3 145 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ZNF438Q7Z4V0 828 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 P2RY11Q96G91 374 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 TBKBP1A7MCY6 615 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 PCDH8O95206 1070 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 LYPLA2O95372 231 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 CCNA2P20248 432 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 LSM3P62310 102 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 EML3Q32P44 896 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 OFCC1Q8IZS5 231 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 UXS1Q8NBZ7 420 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 MLPHQ9BV36 600 aaPredicted RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 TMEM109Q9BVC6 243 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 EPB41L1Q9H4G0 881 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 SALL4Q9UJQ4 1053 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 TMCO1Q9UM00 188 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 TRPV2Q9Y5S1 764 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 A8MX80 341 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 UBXN8O00124 270 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 FFAR3O14843 346 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 GPR42O15529 346 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 TNFRSF21O75509 655 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 TPP2P29144 1249 aaPredicted RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 SCNN1GP51170 649 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 KLF10Q13118 480 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 ACVR2BQ13705 512 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 PTPN20Q4JDL3 420 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 PAGE2BQ5JRK9 111 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 IQSEC1Q6DN90 963 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 SPATA6LQ8N4H0 392 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 YME1L1Q96TA2 773 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 C2orf49Q9BVC5 232 aaPredicted RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 RHOJQ9H4E5 214 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 CRATP43155 626 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 CDH13P55290 713 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 SPIRE1Q08AE8 756 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 CYP2A13Q16696 494 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 ZNF549Q6P9A3 640 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 GPRIN3Q6ZVF9 776 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 CACTIN-AS1Q8N1I8 211 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 COPS5Q92905 334 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 GINS4Q9BRT9 223 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 RTKNQ9BST9 563 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 EGFL7Q9UHF1 273 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 ITGB1BP2Q9UKP3 347 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 MAPRE3Q9UPY8 281 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 TCRBV7S2A1N4TA0A589 114 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 LIN7AO14910 233 aaPredicted RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 PAPSS1O43252 624 aaPredicted RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 BMP10O95393 424 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 AKR1A1P14550 325 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 MAGEC3Q8TD91 643 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 NKD2Q969F2 451 aaPredicted RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 CCDC3Q9BQI4 270 aa13.22□□□□□ -0.29
LCA5-202ENST00000392959 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 HBS1LQ9Y450 684 aaKnown RBP13.22□□□□□ -0.29
LCA5-202ENST00000392959 YDJCA8MPS7 323 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 TAF4O00268 1085 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 TM7SF2O76062 418 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 FYNP06241 537 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 CKBP12277 381 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 EPHX2P34913 555 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 C16orf59Q7L2K0 433 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ADAMTSL2Q86TH1 951 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ADCY4Q8NFM4 1077 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ZHX1-C8orf76Q96EF9 292 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ADAM2Q99965 735 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 WDR55Q9H6Y2 383 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 ABCB10Q9NRK6 738 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 VWA7Q9Y334 891 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 A8MUI8 341 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 CST1P01037 141 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 ERBB2P04626 1255 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 ATP6V0D1P61421 351 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms