RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 HDCP19113 662 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 NFKB1P19838 968 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 OR1G1P47890 313 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 PRKAA1Q13131 559 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 UPP1Q16831 310 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 KIF19Q2TAC6 998 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 PITRM1Q5JRX3 1037 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 IL23RQ5VWK5 629 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 LPCAT2Q7L5N7 544 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 IFNEQ86WN2 208 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 TSPAN14Q8NG11 270 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 CENPIQ92674 756 aaPredicted RBP10.96□□□□□ -0.66
BRF1-204ENST00000392557 SMARCD1Q96GM5 515 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 WDCPQ9H6R7 721 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 TMLHEQ9NVH6 421 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 ABI2Q9NYB9 513 aaPredicted RBP10.96□□□□□ -0.66
BRF1-204ENST00000392557 GIT1Q9Y2X7 761 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 ACOT9Q9Y305 439 aa10.96□□□□□ -0.66
BRF1-204ENST00000392557 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 SAC3D1A6NKF1 404 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 HACD1B0YJ81 288 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 GABRDO14764 452 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ADAMTS4O75173 837 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 TFAP2AP05549 437 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 NMBRP28336 390 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 CASP2P42575 452 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ADARP55265 1226 aaKnown RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 MTX3Q5HYI7 312 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 OGFRL1Q5TC84 451 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 ZFP1Q6P2D0 407 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 LRTOMTQ8WZ04 291 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 TKTL2Q9H0I9 626 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 PRPF19Q9UMS4 504 aaKnown RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 AP4S1Q9Y587 144 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 HEMK1Q9Y5R4 338 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 TLL2Q9Y6L7 1015 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 C5orf42Q9H799 3197 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 A0A1B0GTW7 788 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 PMPCBO75439 489 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ARSAP15289 507 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ADRA1BP35368 520 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 MAGEA6P43360 314 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 INHBCP55103 352 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 CDKL1Q00532 357 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 SP3Q02447 781 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ITKQ08881 620 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 CSHL1Q14406 222 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 PCSK7Q16549 785 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 OTUD1Q5VV17 481 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 LIPMQ5VYY2 423 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 TMEM86AQ8N2M4 240 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ZNF786Q8N393 782 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 RAET1EQ8TD07 263 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 HAPLN3Q96S86 360 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 NPY6RQ99463 290 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 HAUS8Q9BT25 410 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 MRPS26Q9BYN8 205 aaKnown RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 PTTG2Q9NZH5 202 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 TMEM88BA6NKF7 163 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ALDH1A2O94788 518 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 ARL1P40616 181 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 ANO4Q32M45 955 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 SETD3Q86TU7 594 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 DENND6AQ8IWF6 608 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 FSTL5Q8N475 847 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 CD99L2Q8TCZ2 262 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 GLT1D1Q96MS3 346 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 PRICKLE1Q96MT3 831 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 C11orf84Q9BUA3 381 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 NOL11Q9H8H0 719 aaKnown RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 COQ10BQ9H8M1 238 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 GPBP1L1Q9HC44 474 aaPredicted RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 FNDC3AQ9Y2H6 1198 aaKnown RBP10.95□□□□□ -0.66
BRF1-204ENST00000392557 V9GYQ6 96 aa10.95□□□□□ -0.66
BRF1-204ENST00000392557 G3V2L1 256 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 CASQ2O14958 399 aaPredicted RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 MSI1O43347 362 aaKnown RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 FYNP06241 537 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 HOXC8P31273 242 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 CXCR3P49682 368 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 CDH15P55291 814 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 PSME3P61289 254 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 ESRRGP62508 458 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 MPP1Q00013 466 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 TSPY1Q01534 308 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 IRF5Q13568 498 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 ARL13BQ3SXY8 428 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 STXBP5Q5T5C0 1151 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 METTL21CQ5VZV1 264 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 ZBTB49Q6ZSB9 765 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 TRIM67Q6ZTA4 783 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 RNF180Q86T96 592 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 LRRTM3Q86VH5 581 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 METTL25Q8N6Q8 603 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 OR10T2Q8NGX3 314 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 NXNL1Q96CM4 212 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms