RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RPS21P63220 83 aaKnown RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 RAD51Q06609 339 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 DPYSL3Q14195 570 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 GRM3Q14832 879 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 HADHQ16836 314 aaKnown RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 TMCO3Q6UWJ1 677 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 KANSL1Q7Z3B3 1105 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 ADAT2Q7Z6V5 191 aaKnown RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 ABI3BPQ7Z7G0 1075 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 SRLQ86TD4 932 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 RYBPQ8N488 228 aaPredicted RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 KLK6Q92876 244 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 FAF2Q96CS3 445 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 MRFAP1L1Q96HT8 127 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 BMFQ96LC9 184 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 LENG8Q96PV6 779 aaPredicted RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 PSKH2Q96QS6 385 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 TUBGCP5Q96RT8 1024 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 ELF4Q99607 663 aaPredicted RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 KLF6Q99612 283 aaPredicted RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 SLC17A9Q9BYT1 436 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 DEF6Q9H4E7 631 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 ACACAQ13085 2346 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 RP1P56715 2156 aa11.52□□□□□ -0.56
IGHV4-28-201ENST00000390612 MYLKQ15746 1914 aa11.52□□□□□ -0.56
IGHV4-28-201ENST00000390612 ANKRD11Q6UB99 2663 aaPredicted RBP11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 SPAARA0A1B0GVQ0 90 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 RAD51BO15315 384 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 FLRT2O43155 660 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 MAGEC1O60732 1142 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 PALMO75781 387 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 DKK1O94907 266 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 PRLRP16471 622 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 CR2P20023 1033 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 ARHGAP25P42331 645 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 CCT8P50990 548 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 SUOXP51687 545 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZNF75DP51815 510 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 HADHBP55084 474 aaKnown RBP11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 CDH6P55285 790 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC10A7Q0GE19 358 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 STAT4Q14765 748 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 PAFAH1B3Q15102 231 aaKnown RBP11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 PDK2Q15119 407 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 TRIP6Q15654 476 aaKnown RBP11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 TMEM52BQ4KMG9 183 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC45A4Q5BKX6 768 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 PRAMEF14Q5SWL7 426 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 GCNT7Q6ZNI0 430 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 PCDH19Q8TAB3 1148 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 FAM174AQ8TBP5 190 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 SAP25Q8TEE9 199 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 RFFLQ8WZ73 363 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 ECHDC3Q96DC8 303 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 EXOC2Q96KP1 924 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZNF641Q96N77 438 aaPredicted RBP11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 SUV39H2Q9H5I1 410 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 GDF3Q9NR23 364 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 GGT7Q9UJ14 662 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 CA5BQ9Y2D0 317 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 BTBD3Q9Y2F9 522 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 LRP4O75096 1905 aa11.52□□□□□ -0.57
IGHV4-28-201ENST00000390612 IGLON5A6NGN9 336 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZNF487B1APH4 448 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 DFFAO00273 331 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 TRAFD1O14545 582 aaPredicted RBP11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 YKT6O15498 198 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 PIGNO95427 931 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 PAK4O96013 591 aaPredicted RBP11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 KRT7P08729 469 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 ITIH2P19823 946 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 AKT2P31751 481 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 SERPINB6P35237 376 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 SIM1P81133 766 aaPredicted RBP11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 GALNT2Q10471 571 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 LBRQ14739 615 aaKnown RBP11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 SUZ12Q15022 739 aaKnown RBP11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 ANKRD20A8PQ5CZ79 823 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 TTC7BQ86TV6 843 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZSWIM9Q86XI8 627 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 VSIG1Q86XK7 387 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 CAMK1DQ8IU85 385 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 RHOT2Q8IXI1 618 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 PGBD5Q8N414 524 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 OXR1Q8N573 874 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 TEX26Q8N6G2 289 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 PQLC3Q8N755 202 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 FATE1Q969F0 183 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 CENPTQ96BT3 561 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 KLHDC7BQ96G42 594 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 ZNF670Q9BS34 389 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 SP110Q9HB58 689 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 TOR4AQ9NXH8 423 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
IGHV4-28-201ENST00000390612 ITM2BQ9Y287 266 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms