RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 NSUN4Q96CB9 384 aaKnown RBP4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 MMABQ96EY8 250 aaPredicted RBP4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 TIGD1Q96MW7 591 aa4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 KIF9Q9HAQ2 790 aa4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 ABI3Q9P2A4 366 aa4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 LYVE1Q9Y5Y7 322 aa4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 COX11Q9Y6N1 276 aa4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 ARHGEF17Q96PE2 2063 aaPredicted RBP4.79□□□□□ -1.64
RNU6-549P-201ENST00000384433 SETD1BQ9UPS6 1966 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FAM90A8PA6NJQ4 464 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CGB1A6NKQ9 187 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 LRRC53A6NM62 1247 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ZNF814B7Z6K7 855 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TAF4O00268 1085 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TIMM44O43615 452 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TLR2O60603 784 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ATP2C2O75185 946 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CCNDBP1O95273 360 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 OR2C1O95371 312 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FAM90A13PP0C7W8 464 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FAM90A24PP0C7X0 464 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 IL7RP16871 459 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ZNF8P17098 575 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 RFC1P35251 1148 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 PPARGP37231 505 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ARL1P40616 181 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 UBA7P41226 1012 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 PPP3CCP48454 512 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CLNS1AP54105 237 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 RPS13P62277 151 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CUL4AQ13619 759 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 RUNX2Q13950 521 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 Q4G0T1 1027 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 DUSP28Q4G0W2 176 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 C6orf10Q5SRN2 563 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CES5AQ6NT32 575 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TSSK4Q6SA08 328 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 BRINP3Q76B58 766 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 GALNT5Q7Z7M9 940 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TBC1D26Q86UD7 250 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TICAM2Q86XR7 235 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FAM217AQ8IXS0 508 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CEP76Q8TAP6 659 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 NTN5Q8WTR8 489 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ARHGEF2Q92974 986 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ZKSCAN4Q969J2 545 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FAM120BQ96EK7 910 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 CMTM3Q96MX0 182 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 WDR83Q9BRX9 315 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 MXD3Q9BW11 206 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 MRIQ9BWK5 157 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 STRA6Q9BX79 667 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 B3GNT4Q9C0J1 378 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 MAP6D1Q9H9H5 199 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FBRSL1Q9HCM7 1045 aaKnown RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 SEL1LQ9UBV2 794 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 COG5Q9UP83 839 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 FAM96BQ9Y3D0 163 aa4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
RNU6-549P-201ENST00000384433 TYW5A2RUC4 315 aaKnown RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 E5RJQ4 531 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 MASP2O00187 686 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 EBAG9O00559 213 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 PRPF4O43172 522 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 SEC14L5O43304 696 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 TLX3O43711 291 aaPredicted RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 HNRNPCL1O60812 293 aaKnown RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 AKR1B1P15121 316 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 PTPN2P17706 415 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 SHMT1P34896 483 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 CXorf66Q5JRM2 361 aaPredicted RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 PRAMEF19Q5SWL8 479 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 GKAP1Q5VSY0 366 aaPredicted RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 QSOX2Q6ZRP7 698 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 PTF1AQ7RTS3 328 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 HAPLN4Q86UW8 402 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 OR8H2Q8N162 312 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 MCPH1Q8NEM0 835 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 GJC3Q8NFK1 279 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 GPT2Q8TD30 523 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 SCFD2Q8WU76 684 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 SMARCE1Q969G3 411 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 ERP27Q96DN0 273 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 SORCS2Q96PQ0 1159 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 SERINC2Q96SA4 455 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 NUDT16L1Q9BRJ7 211 aaKnown RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 H2AFJQ9BTM1 129 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 TUBB6Q9BUF5 446 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 POLDIP3Q9BY77 421 aaKnown RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 CCDC68Q9H2F9 335 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 DDX4Q9NQI0 724 aaKnown RBP4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 NSMCE4AQ9NXX6 385 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 EHD2Q9NZN4 543 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 FLRT1Q9NZU1 646 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 HAO1Q9UJM8 370 aa4.77□□□□□ -1.65
RNU6-549P-201ENST00000384433 A3GALT2U3KPV4 340 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms