RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SNX27Q96L92 541 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 GPATCH1Q9BRR8 931 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 TDRD1Q9BXT4 1180 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ARMC7Q9H6L4 198 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 PCDHGB1Q9Y5G3 927 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 AP4B1Q9Y6B7 739 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 NKRFO15226 690 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 KMOO15229 486 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 GRID2O43424 1007 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 KRT34O76011 436 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 HSD17B4P51659 736 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 IMPG1Q17R60 797 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 THAP5Q7Z6K1 395 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 MPP5Q8N3R9 675 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 GLMNQ92990 594 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ATG4CQ96DT6 458 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 PUS7LQ9H0K6 701 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SCUBE2Q9NQ36 999 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ZSWIM5Q9P217 1185 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 C2orf74A8MZ97 194 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ALOX15BO15296 676 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 PPP3CCP48454 512 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 GRM2Q14416 872 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 DHRS4L2Q6PKH6 230 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SH3BP5LQ7L8J4 393 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ASCC1Q8N9N2 400 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 RADILQ96JH8 1075 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ST6GALNAC4Q9H4F1 302 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SERHL2Q9H4I8 314 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SERHLQ9NQF3 203 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 NDFIP2Q9NV92 336 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 H2AFY2Q9P0M6 372 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 CDH7Q9ULB5 785 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 STON1Q9Y6Q2 735 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 C5orf58C9J3I9 102 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ZBTB39O15060 712 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 UBDO15205 165 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 GSC2O15499 205 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ATMINO43313 823 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 DDNO94850 711 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 OAS1P00973 400 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 GLI1P08151 1106 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 MBL2P11226 248 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 FGFR4P22455 802 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 RPA1P27694 616 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 EMC2Q15006 297 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 CDC42EP5Q6NZY7 148 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM270Q6UE05 265 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ATG14Q6ZNE5 492 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 DENND6AQ8IWF6 608 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 OR2T34Q8NGX1 318 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 OR2T3Q8NH03 318 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 PEX13Q92968 403 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 PSMB7Q99436 277 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 TLR6Q9Y2C9 796 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 KCPQ6ZWJ8 1503 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 CABYRO75952 493 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 UGT1A1P22309 533 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM62Q0P6H9 643 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 DMC1Q14565 340 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SV2CQ496J9 727 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 LIN54Q6MZP7 749 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 RGMBQ6NW40 437 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 KLHL24Q6TFL4 600 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 DCP2Q8IU60 420 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 TBC1D10CQ8IV04 446 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SLC20A1Q8WUM9 679 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 DNAJA4Q8WW22 397 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SPATA5L1Q9BVQ7 753 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 XPNPEP3Q9NQH7 507 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 TAS2R7Q9NYW3 318 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ACSL5Q9ULC5 683 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 SAMD4AQ9UPU9 718 aaKnown RBP4.92□□□□□ -1.62
PTPRD-203ENST00000381196 IFT52Q9Y366 437 aa4.92□□□□□ -1.62
PTPRD-203ENST00000381196 ANKDD1BA6NHY2 528 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 MED24O75448 989 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 MLYCDO95822 493 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 FTLP02792 175 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 AKR1A1P14550 325 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SP3Q02447 781 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 C10orf120Q5SQS8 335 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 TDRD10Q5VZ19 366 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ACAD10Q6JQN1 1059 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PAOXQ6QHF9 649 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 C15orf52Q6ZUT6 534 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ILDR1Q86SU0 546 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF410Q86VK4 478 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NPLOC4Q8TAT6 608 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 FAM84BQ96KN1 310 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PAIP1Q9H074 479 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 UNC93B1Q9H1C4 597 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SARS2Q9NP81 518 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ADPRHL2Q9NX46 363 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 LEF1Q9UJU2 399 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 AP4E1Q9UPM8 1137 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 COL18A1P39060 1754 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PRKYO43930 277 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ARHGEF15O94989 841 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PRLP01236 227 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 RPS5P46782 204 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms